Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0056 ATGCCTCCAAGGAAAAAATCCAACGCTTCTTCTTCTTCTTCCTCTTCCAAGAAACCTTCCAAATTCGGCATTCAACACTTCTTCGATCGCCACACTGCTTCTCAGCAGAAGATTCAACAATCCAATGATGCAAACCCCAACACTGCTTCCGATTCCAAACCTACCACTGATTTTACGGTTTTACCCTCTCCGAATCTTCCAGAACCTTCTGGATCGTCGAAATCAGGACATGTTGTTCTCAGAACGGATGCGCTGGATGCTTCGCATAACAGTGGTGGTAGTAATAACAACGATGTTGATCGGCCGTCGGAGGTTACTCCTCCGGAGAGTTTGGTGTTGCCGGGGAGTGATAATGCGGCGACTGAGAGTTTCGCGGCCGAGGAGTCTCCGGAGATGTCTAAGTCTGTGTCACTTAAACGCTTCAAATTCTCACCTGGGATGTTTATAAAGCAAAGTCAGGATGATGGGGCTGACGAGGTTACATGGAAGATATCTCCAGTGAATGAAAGACTCCAAGCAGTTTCGAAACAGATGCCTGCGATAATTAAAGCACTATCTGACACTTCGAGAATCAACTTGTTGCCATTCCGCAGCTGCTCAGAAAATAAGGATTCTCTTGATAAAGATGGAAAGGTTGAAAAGTTGTTTACTTCACCTACTCCCAAGGCTTCTGCAAAATCTCTGGTGTCAATGAGTAAATTAGGGTTGAAAAGGATAAACCCAGATCGTGATGTGGATTCTAATATCAGTGCGGGTGCTGTGAGTAACTCTGAAGCATCTAGTGGAGAGAGTCCCTTCAGAACTCCACCATCTTTGTCTTATTGCTCTGATAAGCTTGTCAAGGATATTGAGCGGAGTGGACCACCTCATCACTCTTATTTGAGACACAAAAAGGAATTTCTTGAGCTGTTAGATCAAGTTGAAGATGCCATTGCTGTTGACGATGCTAATGTCTGTAATCAAAGCATTTCCTCTTTTAAATCTCAAGATGGAGTTGCTGATGAGCTTCCTGTCATAGCCAACCATAAAGTAGAAAAGACAAAATCACAAATACCTAAAGAGGTTGTTGGTGTGTTCTCCAATTATATTTTTTTGGTTTTGGAGGTGACTGAAAAATTTAGGATTTCTGATTCATCCGCTGCTGGATGCCAATACAAGGTGCTCCGTTTACTAAATGAACAAACTGGGGAAGAACGGGCTGTAAACTTGTGGGATGAGTGGTCTTGCAGCGTAGTTGCGCCTGGAGACACTGTGAATGTAATCGGTCAATTTGAAGGGGGAAATTGCAATGTTGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGATGTCTGGAACACGGGTTGCTTCCAGTTTCAGTTGTGCAAGGAGAACTGTCTTAGATGAGAGGATAAAATCAAACGAGTACTCAATTGCAGCTCTAACTGGAACCCTGCTTCACCAAATTTTCCAGGCTGGGCTTATAAAAGTGTCTCCCACGGTAAACTTCTTGGAAGAATATGCAGAAGTGGTATTACAAAGAAACGTCGAAAGTTTGTATGCATGCCAAGAAAATGAAGACAATGTTCGCAAAACCTTGATTAATTCTATCCCAAAATTATTGAGTTGGATCGGACAGTTCAAGAATACGGAGGAACGAAAAAACCCCAATGTTAATTTCAGATTTGATGATTGCCAGAAGAAAGTTATCATATCTGAGGTAATTGATATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATTCTTCTCTTAGAGTGAAAGTTCAATCAACAAAAGATGAAGGGGAGAAGATCATGCCATTAGAGTTCAAAACTGGAAAATCATCAAATAGCCAGTCATTAGTAGAACACCGTGCTCAAGTAATATTGTACACTCTCCTGATGTCTGAAAGGTACCAGAAGACTATTGATTCTGGTCTTCTGTACTATCTCCAATCAGATCAGACACAGGGTATTGTTGCTGAAAGATCTGACTTAGTGGGATTAATAATGCGACGTAATGAGCTAGCCAGTGATATTCTTAAGGCATTGACCTTGCAACAACTGCCACCAATGTTACAGAGTCCTAGCCTTTGCAGAAGTTGTCGCCATCTTGATGTTTGTAGCATTTATCATAAGGCACATGGTGGAAGCACAGAGGGCAGTGGACTGGGAAATGTGTTTGATTCTCATACTAATCACCTGACATCTACTCATTCTAAGTTCCTCTGCCATTGGGATCGACTAATTGACTTAGAAGCTAAAGGGACTGAGCTTTTAAAGAAACAAGTATGGCGATCACATGGCTTGAAGAATCCAATCAATGGTGGCCTTTCCTCTATTGTTCTTGATTCTTCGCATGGAATTCCTAATGATAAATCTCCAAAAGACAATTATTTCATATATCGTTTTGTACGACAAGATACTTCACGTCTCTCTGAAGCATCAGATGGTGATCCTTCTAGTGCTTCTCCAAATGATTTAGATCTCACACTTCGAAGTGGAGACCACGTGATACTGAGCAATGAATCTAGCCATCAAACTATTGCAAGGGGGGTGATCTCAGATATTAGTCAGATTCATGTATCCGTTTCCTTTTCTAAATGCTTAAGAATTCCTGGTAGGTCTTCCACTACGCACGATCTCCTTGAACAGGTTTGGAGACTTGATAAGGATGAATATGTCACATCATTTGCAATTATGAGGTTTAATCTTGTACAACTGTTTTTGCAAAATGATCGAAGTGGTCATCTGCGGAGAATGATTGTTGACCTAGAGGCTCCTAGGTTTGACAGTGGGTCTGTAGTTAGCCAGGATCCAGCGATATCCTATGTTTGGTCGGAGAAGAGTTTGAATGATGATCAACGTAGAGCAGTTCTTAAGATACTTACAGCAAAAGATTATGCACTTATATTAGGGATGCCTGGAACGGGGAAGACATCCACAATGGTTCATGCTGTGAAATCCTTGCTGATTAGGGGCACATCCATTTTGCTGACGGCCTACACAAACTCTGCTGTTGATAATTTACTCATCAAATTAAAAGCACAGGGAATTGATTTTGTACGTATTGGAAGAGCTGAAGCAGTGCATGAGGATGTCAGAGAACACTGCCTTTCAGCAACACATGTAAAAAGTGTTGAAGATATCAAAATAAGCTGGGCAGACCACTCTACCGGTATCCTTGGGCCCTCTAACTTTTGCTTCGGTGTTCGTACTTGTTGGGGATCATTATCAACTACCTCCGCTTGTCCAGAGGCACGAGAGAATGGCATGGGGGTAAGTTTGTTTCGTAGACTCTCAGAGGCACATCCACAAGCAATTTCAGCATTGCAGAGTCAGTACCGGATGTGTCAGAGCATTATGGATCTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCGTCCGAGATAGCTAACAGAAAACTGGAATTTTCTGGCTTAAAATGTGGTTTTCCTTGGCTAGAAGATGTTTTAGTTCCAAGCAGGCCAGTGGTATTTATTGATACTGATATGTTGCCTGCTTTGGAGACAAGAGATCAGAAGATTATAAAGAACCCTCTTGAAGCTCACATAATTGCCGAGATATCAAAGGAATTGGTCAATAATGGGATTGCAGTAGAACAAATTGGCGTTATTACCCCCTATAATGCTCAGGCAAACCTCATTCGACATGCTGCTTGCATGACTTCCTTGGAGATACATACCATTGACAAATACCAGGGTAGAGATAAGGATTGCATTTTAGTATCTTTTGTAAGGTCTAGTGAAGATCCAACAAGCAGTGCTGCTTCTTTGCTTGGAGATTGGCACAGGATAAATGTGGCTCTCACTCGTGCAAAGAGAAAGTTGATCATGGTGGGGTCTCGTAGAACTCTATCAAAGGTTCCACTACTGAAGCTTCTCATTAAGAAGGTTGAGATGCAGTCTGGAATTTTAAGTGTCTCTAAGAAGGACATCTTTCAAACAGGTGAGCTCAAGAGATGTTCCCAAATGAGATGA 4014 0.4178 MPPRKKSNASSSSSSSKKPSKFGIQHFFDRHTASQQKIQQSNDANPNTASDSKPTTDFTVLPSPNLPEPSGSSKSGHVVLRTDALDASHNSGGSNNNDVDRPSEVTPPESLVLPGSDNAATESFAAEESPEMSKSVSLKRFKFSPGMFIKQSQDDGADEVTWKISPVNERLQAVSKQMPAIIKALSDTSRINLLPFRSCSENKDSLDKDGKVEKLFTSPTPKASAKSLVSMSKLGLKRINPDRDVDSNISAGAVSNSEASSGESPFRTPPSLSYCSDKLVKDIERSGPPHHSYLRHKKEFLELLDQVEDAIAVDDANVCNQSISSFKSQDGVADELPVIANHKVEKTKSQIPKEVVGVFSNYIFLVLEVTEKFRISDSSAAGCQYKVLRLLNEQTGEERAVNLWDEWSCSVVAPGDTVNVIGQFEGGNCNVDHDNNFLIVHPDILMSGTRVASSFSCARRTVLDERIKSNEYSIAALTGTLLHQIFQAGLIKVSPTVNFLEEYAEVVLQRNVESLYACQENEDNVRKTLINSIPKLLSWIGQFKNTEERKNPNVNFRFDDCQKKVIISEVIDIEEMAWAPKYGLKGMIDSSLRVKVQSTKDEGEKIMPLEFKTGKSSNSQSLVEHRAQVILYTLLMSERYQKTIDSGLLYYLQSDQTQGIVAERSDLVGLIMRRNELASDILKALTLQQLPPMLQSPSLCRSCRHLDVCSIYHKAHGGSTEGSGLGNVFDSHTNHLTSTHSKFLCHWDRLIDLEAKGTELLKKQVWRSHGLKNPINGGLSSIVLDSSHGIPNDKSPKDNYFIYRFVRQDTSRLSEASDGDPSSASPNDLDLTLRSGDHVILSNESSHQTIARGVISDISQIHVSVSFSKCLRIPGRSSTTHDLLEQVWRLDKDEYVTSFAIMRFNLVQLFLQNDRSGHLRRMIVDLEAPRFDSGSVVSQDPAISYVWSEKSLNDDQRRAVLKILTAKDYALILGMPGTGKTSTMVHAVKSLLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRAEAVHEDVREHCLSATHVKSVEDIKISWADHSTGILGPSNFCFGVRTCWGSLSTTSACPEARENGMGVSLFRRLSEAHPQAISALQSQYRMCQSIMDLSNALIYGDRLRCGSSEIANRKLEFSGLKCGFPWLEDVLVPSRPVVFIDTDMLPALETRDQKIIKNPLEAHIIAEISKELVNNGIAVEQIGVITPYNAQANLIRHAACMTSLEIHTIDKYQGRDKDCILVSFVRSSEDPTSSAASLLGDWHRINVALTRAKRKLIMVGSRRTLSKVPLLKLLIKKVEMQSGILSVSKKDIFQTGELKRCSQMR* 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0056 1337 MobiDBLite consensus disorder prediction 249 270 - -
Lan8g0056 1337 MobiDBLite consensus disorder prediction 1 131 - -
Lan8g0056 1337 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 951 1303 IPR027417 -
Lan8g0056 1337 Gene3D - 884 1058 IPR027417 -
Lan8g0056 1337 Gene3D - 1116 1323 IPR027417 -
Lan8g0056 1337 Pfam AAA domain 1094 1294 IPR041679 -
Lan8g0056 1337 Gene3D - 447 710 IPR011604 -
Lan8g0056 1337 MobiDBLite consensus disorder prediction 87 103 - -
Lan8g0056 1337 CDD SF1_C_Upf1 1118 1311 IPR041679 -
Lan8g0056 1337 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE 1083 1337 - -
Lan8g0056 1337 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE 11 1030 - -
Lan8g0056 1337 Pfam AAA domain 952 1047 IPR041677 GO:0004386
Lan8g0056 1337 PANTHER DNA2/NAM7 HELICASE FAMILY 1083 1337 IPR045055 -
Lan8g0056 1337 PANTHER DNA2/NAM7 HELICASE FAMILY 11 1030 IPR045055 -
Lan8g0056 1337 MobiDBLite consensus disorder prediction 1 21 - -
Lan8g0056 1337 Pfam DNA replication factor Dna2 393 593 IPR014808 -
Lan8g0056 1337 MobiDBLite consensus disorder prediction 241 270 - -
Lan8g0056 1337 MobiDBLite consensus disorder prediction 29 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0056 Lan-Chr8 714890 749222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0056 1 1052 Core DNA Replication Machinery Family AT1G08840 52.661 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0056 K10742 - gmx:100799415 1649.41