Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0055 ATGGGTTCTGTAAGTACCTCAAATCCATTTGCACCAAATACTGTTTTCAAAGATTGTTCTCAAGGAATTTGCAGCATATATTGTCCTCAATGGTGTTACATAATTTTCTCACCACCTCCTCCTTCAATAACAACACTTGGTGCTGATGACTTAGATGATGATTCTTCATCAAGTTTTCAATTTTCTCCTCTTATAGTTGCTGTTATTGGAATCTTAGCAAGTACTTTCATCTTGGTTACTTACTATACCATCATTTCAAGGTTCTGCAAGAGTAGAAATAATGATCCTACCAACTCAGAAATGGAGCATAATCATGAAGGTGGTGTGAACAATGAGTTGGTTCAAGTTTCTTCTTCATCTTCTGGCTTAGATGAGACTCTCATCAAATCTATAACAGTTTGTAAGTATAAGAAGAATAGTGTTTTGGTTGATGGTAGTGATTGTTCTGTTTGTTTGAGTGAGTTTGAAGAGAATGAGAATTTGAGATTGTTGCCTAAGTGTAACCATGCTTTTCATATTCCTTGTATTGATCCTTGGTTGAAATCACACTCGAGTTGTCCTTTGTGTCGATCGAATATTGATCCGAATCAAAGAGATTGTAGTTCGATATTGATGGAAGTACCAACTACCATGAACATGAGTATCAATGCATTGGAATACCAGCATATGAGTGATGATGTTATTATAGTTATTCAGAGTTCTGAGACAAGTGAACAGCAAGAAGATTCGGTTAGTTTCGGAGATGAAGTTCTACCAAAGTGGCCAGCGGAAAGTGCTGCTGCTAATGATGATGAAGATAATACTATTGAGCAGTTAGATGTGAATAATCTAAGAAGGGTTTCGGTTCGCGATATACTGAACGATAATGACCATGATGTGGAGTTGCAGAGGGAGGGATCTGATACTGGATCATCAACAAGGTATGGTAGTAAGTAA 936 0.3707 MGSVSTSNPFAPNTVFKDCSQGICSIYCPQWCYIIFSPPPPSITTLGADDLDDDSSSSFQFSPLIVAVIGILASTFILVTYYTIISRFCKSRNNDPTNSEMEHNHEGGVNNELVQVSSSSSGLDETLIKSITVCKYKKNSVLVDGSDCSVCLSEFEENENLRLLPKCNHAFHIPCIDPWLKSHSSCPLCRSNIDPNQRDCSSILMEVPTTMNMSINALEYQHMSDDVIIVIQSSETSEQQEDSVSFGDEVLPKWPAESAAANDDEDNTIEQLDVNNLRRVSVRDILNDNDHDVELQREGSDTGSSTRYGSK* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0055 311 Pfam Ring finger domain 147 190 IPR001841 -
Lan8g0055 311 SUPERFAMILY RING/U-box 133 196 - -
Lan8g0055 311 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 10 247 - -
Lan8g0055 311 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 10 247 IPR044675 -
Lan8g0055 311 SMART ring_2 148 189 IPR001841 -
Lan8g0055 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 196 IPR013083 -
Lan8g0055 311 CDD RING-H2_PA-TM-RING 147 190 - -
Lan8g0055 311 ProSiteProfiles Zinc finger RING-type profile. 148 190 IPR001841 -
Lan8g0055 311 MobiDBLite consensus disorder prediction 287 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0055 Lan-Chr8 710957 712244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0055 8 307 C3H Transcription Factor Family AT5G17600 41.195 2.44e-66 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0055 - - lang:109355345 585.874