Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0031 ATGGCATTGCAGAACATTGGTGCTGGAAATAGTGATGATGCCTTCTATAGGTATAAGATGCCTAGAATGATTACCAAAATTGAAGGTAGAGGTAATGGCATCAAAACAAATGTTGTCAACATGGTTGATATTGCTAAGGCATTGGCAAGGCCAGCATCTTACACAACAAAGTATTTTGGCTGTGAACTTGGAGCCCAATCGAAATTTGATCAGAAAACTGGCACTTCTCATGTAAACGGGGCGCATGATACTGCTAAACTTGCAGGCCTTCTTGAGAACTTCATCAAGAAATACGTCCAATGTTATGGTTGTGGGAATCCTGAAACCGAGATCTTGATTACTAAGAGTCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTATATCCGACGTGGATATGAGAGACAAGTTGACTACCTTTATCATCAAGAACCCTCCTGAAGTGAAGAAAGGATCGAAAGACAAGAAGGCTATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAAGCAGCTGACGAGGAACTGAAAAAATTGAAGAAAGAGGTTAAGAAAGTTCCTTCTTCGTCAAAGACTGGAACGACGAAATCTATCTCTTCAAAGAAGAAAGGAAGTGGCTCTGATGAAGACCGTACATCGCCTACTCACAGCCAAATTGATGAGAAAGAGGTTTCTCATGATGAAGATGAAGATGGTGATGATGATGTCCAATGGCTAACAGATACATCACTAGATGCTGCTCGCCAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCCGATATGGTCATGCTCTCTACTGAAGAACCTGAGAAGAAGAAAAAAGCAGCAGGTAAGGCAAGTGATAGTTCCGAGAATGGTAACACGAAGGATAAACTGGCTGGGGAAGTGAAAGCAAGTTTGAAGAAAGGCGTTGGTGCAAAAGAATTGCAGTCCCATCTGGCTACACTTCCTGGATCTGCTGAAGATAAGATGACCGCTCTGTTTGAGGCCCTGTTTGAGGGAGTCGAGAAAGGTTTCGCTAGAGAAGCAATTAAGAAGAAGAGCTACCTCGCTGTTGCAGTTACCGGGGAAGAGGATTCACAGCTGTTATTGCTTCATGCTATCGAGGAATTTTCTAGCAAGTCTACTTCCAATGCACTGAAGGAGGTTGCACTGCTTTTGAAAACTCTGTATGATGCTGATGTGTTGGAGGAAGAGTCCATAGTGGAGTGGTATTCGAAAGGACTGAAGGGAAATAAAAAGGACTCTCAGCTTTGGAAGAATGTTCAACCATTCATTGATTGGCTTCAGAGTGCTGAATCAGAATCGGAGGACGAGTAA 1326 0.4314 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDQKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEILITKSQMIQLKCAACGFISDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKEVKKVPSSSKTGTTKSISSKKKGSGSDEDRTSPTHSQIDEKEVSHDEDEDGDDDVQWLTDTSLDAARQRIQEQLSAVTADMVMLSTEEPEKKKKAAGKASDSSENGNTKDKLAGEVKASLKKGVGAKELQSHLATLPGSAEDKMTALFEALFEGVEKGFAREAIKKKSYLAVAVTGEEDSQLLLLHAIEEFSSKSTSNALKEVALLLKTLYDADVLEEESIVEWYSKGLKGNKKDSQLWKNVQPFIDWLQSAESESEDE* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0031 441 MobiDBLite consensus disorder prediction 149 237 - -
Lan8g0031 441 MobiDBLite consensus disorder prediction 149 188 - -
Lan8g0031 441 SMART 542_3 349 437 IPR003307 GO:0005515
Lan8g0031 441 CDD W2_eIF5 289 439 - -
Lan8g0031 441 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Lan8g0031 441 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Lan8g0031 441 MobiDBLite consensus disorder prediction 203 224 - -
Lan8g0031 441 ProSiteProfiles W2 domain profile. 280 441 IPR003307 GO:0005515
Lan8g0031 441 MobiDBLite consensus disorder prediction 267 295 - -
Lan8g0031 441 Gene3D - 286 441 - -
Lan8g0031 441 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 441 - -
Lan8g0031 441 SUPERFAMILY ARM repeat 293 435 IPR016024 -
Lan8g0031 441 Gene3D - 3 104 - -
Lan8g0031 441 Pfam eIF4-gamma/eIF5/eIF2-epsilon 363 441 IPR003307 GO:0005515
Lan8g0031 441 Gene3D - 105 145 - -
Lan8g0031 441 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Lan8g0031 441 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 441 IPR045196 GO:0003743|GO:0006413
Lan8g0031 441 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0031 Lan-Chr8 259093 261069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0031 1 434 Eukaryotic Initiation Factors Gene Family AT1G36730 63.596 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0031 K03262 - gmx:100778073 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0040 9 248390 251343 Lan8g0031 8 259093 261069 LSH
Lan2g0053 2 489571 492466 Lan8g0031 8 259093 261069 LSH