Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0020 ATGAAAACCCTCTTGTTTCACCAATCTTGTTCCATTTTATTCACTTTTATGATCTCAACATATGTTTTTGCCAATGATTACACCAAGTGCAATGATGCTTATAGTTGTGGAAGCATAATAAACCTCACGTATCCATTCTCGGGTGGAAACAGGCCAGACTACTGCGGCGAAGTAAGTGTAAGTTGCGAAAGCAATGTCCCGAAGTTCAGCGTAAATTCGGTGACATATAGGATTCTTGGTTGGGACTTGAAAACACAAAATCTCACAGTTGCTAGGGATGATTTATGGGACAACCTTTGTTTAACTAGTTACCATACAACAACCTTTGATGGCACCATATTTCGTTTTGATGGTGGACTACAAAACGTGACATTGTTATATGATTGCACTTCAAATAATCCTCCAGCGAGTAATAGTAAAACCTGTGGTGATAAAAGTGTGTATTATAGTTTAGGGAATTTTGCTTTTGAGTATTGCACAAGTGTTTATGTTCCTATTTTATTGTCCCAAGTTGGAAGTGTGAATTCAAATATGGATCTGATTCCAGAAGCATTACGAGTTGGTTTTGGGTTGGATTGGGAAAATTATGATGAGTGCAACACATGCATGAACAATAATGGTGGGGTGTGCATAGTTTATGATGGGAAATTCAGTTGTTGCAATGATGGAACTTCATGTCCAGGCTCAGGTGGAAAAAAGAGCAAAGTAGGTGTTGCAATAGGTGCTGCTGCAGGAGCCGTCGCCCTTGTTGCCATTCTTGGTATTGTTTGGTTTATGGTGAAACGAAAGAAAAAAGTCGCTGCTGCTAAGCAACCAAGAAGCGAAGACCTCTTCACGCCTCCTTCGAGCAATGGTGCTTTTACCTCGACAACTAATATGTCACAAAGCGTCCCTTCTTACACCTCTTCCAAGACTGACTCTGTGCCGCCGATGAAGAGCTTCTACTTTGGTGTCCAGGTGTTTACCATTGATGAATTAGAGGAAGCTACCGATAATTTTAACCCTTCTAGAGAGCTTGGCGATGGAGGTTTCGGTACTGTTTATAAAGGTGAACTCAAAGATGGACGCGTAGTTGCCGTGAAACGCCATTATGAGAGCAATTTTAAAAGAGTTCGGCAGTTCATGAATGAAGTTGAGATTCTGGCCCGGTTAAGGCATAAGAACCTGGTAACACTTTTCGGATGCACTTCGAGACATAGCCGAGAACTTCTCCTAGTTTATGAATTCATATCAAATGGAACAGTGGATGACCATCTTCATGGAAATCGAGCGAATTCTAATTTCGTTTCTTGGCCTGTAAGACTAAACATTGCTATTGAAACAGCTGAGGCACTAGCCTACCTCCATGCATCAGATGTCATACACCGCGATGTTAAATCGAACAACATTCTCCTGGATGACAATTTTTGTGTGAAGGTTGCTGATTTCGGCCTGTCAAGGTTGTTCCCGGTTGACGCTACTCATGTGTCAACTGCTCCTCAAGGAACACCTGGCTATGTTGACCCGGAGTATTATCAGTGCTACCAACTCACTGATAAGAGTGATGTCTATAGCTTCGGAGTTGTCTTAATTGAGCTTATATCATCGCTACAAGCCGTGGATGTTAGCAGGCATCGCAACGATGTGAATTTAGCCAACATGGCTGTTAATAAAATTCAAAACCAAGAACTTCATGACTTGGTTGATCCAAATCTTGGATATGACAAAGACTACGGTATACGGAGGATGACAACAGGAGTTGCCGAATTAGCATTCCGGTGTTTGCAGCAGCAGAGGGACATGAGACCCTCTATGGATGAAGTGTTGGAGGTCTTGAGAGGAATCAAGAGTGATGAATTTGGTGCAACAAGGGAAGCTGATGTAGTGAATGTTAGGACAGAAGAAGTTATGCTTTTGAACAATGTACATTATCCACTTTCTTCAACAGATTCATTTGATGATAAACAGGAGATGCTAAGAAGAACAGCTTAA 1971 0.416 MKTLLFHQSCSILFTFMISTYVFANDYTKCNDAYSCGSIINLTYPFSGGNRPDYCGEVSVSCESNVPKFSVNSVTYRILGWDLKTQNLTVARDDLWDNLCLTSYHTTTFDGTIFRFDGGLQNVTLLYDCTSNNPPASNSKTCGDKSVYYSLGNFAFEYCTSVYVPILLSQVGSVNSNMDLIPEALRVGFGLDWENYDECNTCMNNNGGVCIVYDGKFSCCNDGTSCPGSGGKKSKVGVAIGAAAGAVALVAILGIVWFMVKRKKKVAAAKQPRSEDLFTPPSSNGAFTSTTNMSQSVPSYTSSKTDSVPPMKSFYFGVQVFTIDELEEATDNFNPSRELGDGGFGTVYKGELKDGRVVAVKRHYESNFKRVRQFMNEVEILARLRHKNLVTLFGCTSRHSRELLLVYEFISNGTVDDHLHGNRANSNFVSWPVRLNIAIETAEALAYLHASDVIHRDVKSNNILLDDNFCVKVADFGLSRLFPVDATHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLIELISSLQAVDVSRHRNDVNLANMAVNKIQNQELHDLVDPNLGYDKDYGIRRMTTGVAELAFRCLQQQRDMRPSMDEVLEVLRGIKSDEFGATREADVVNVRTEEVMLLNNVHYPLSSTDSFDDKQEMLRRTA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0020 656 SUPERFAMILY Protein kinase-like (PK-like) 307 609 IPR011009 -
Lan8g0020 656 MobiDBLite consensus disorder prediction 271 291 - -
Lan8g0020 656 SMART serkin_6 333 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0020 656 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 27 648 - -
Lan8g0020 656 CDD STKc_IRAK 339 608 - -
Lan8g0020 656 Gene3D Transferase(Phosphotransferase) domain 1 410 621 - -
Lan8g0020 656 MobiDBLite consensus disorder prediction 276 291 - -
Lan8g0020 656 Pfam Wall-associated receptor kinase C-terminal 153 222 IPR032872 -
Lan8g0020 656 Pfam Protein tyrosine and serine/threonine kinase 336 604 IPR001245 GO:0004672|GO:0006468
Lan8g0020 656 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 27 648 IPR044652 -
Lan8g0020 656 Gene3D Phosphorylase Kinase; domain 1 308 409 - -
Lan8g0020 656 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Lan8g0020 656 ProSiteProfiles Protein kinase domain profile. 333 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0020 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0020 Lan-Chr8 151686 156825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0020 28 648 Receptor kinase-like Gene Family AT1G25390 43.606 5.50e-155 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lan8g0020 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0020 - - cam:101490779 696.427