Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0019 ATGATGAATGCAAATGAAGCTTCATTCTATTCCTTCTATCTACACAAACATGTATCAATCTTTTTCATTACAATCCTACTCTTTTTTCACCAATCTTCACCTTCTAATAATGATCCAAAACTATGTCCTTCTTCTTCTTGTGGCAAAATTCACAATATATCTTATCCCTTTAGACTCAAAACTGATCCAAACACTTGTGGAGATACAAGATATGAATTAGAATGCCACAACAACATGACATTATTATTAACTCTATTTTCAGGCAAATATTATGTACAAGATATTGATTACAAGAAATATACAATTCATGTTAGTGATGTTGGTGTTATTGAGGATAATATTTGCTCATTCATTCCTAGCTATTTCTTATATGAAGGTAGTTTTGGTTACAATTTCATTGGTCCTGGAATCAACCCTTTTAAATTGGATGATACTATGAGAATATCATACTTCAATTGTTCCAATATGATCATTGATGATGATAAATATGTGAATGTGGATGCTACTCCTTGTGGCTCAAGAGGGCACATCTATGTTGTTCTTGATAATTCTTCAAATCGTAATTTTAGTGTGAAGGACATAAAGATTGGGTGCCAACTTAAGGTATCTACTTTTGCAAATTGGACAACAATCAAATATGACAAGAACAAGAACAATAATGTTTCCTATGTTGACATTCACAACATGTTGGTATATGGATTTAGGTTATCATGGCTATATGTTATTTGTGAAGATAAATGTGGAAAGGGTTTTGAATGCCATGTTCTAGATGAATCCATAGGAGAAGTTCAATGTAATCAAGATCAACTATGTCCTTATGTCTATGATGGCCCAAACAAATTCACCTACAATTGTGGTGGCTCGGGAATTTGGTACAAGATCGGAGATTTTATTGTAGGTTATGCCGTTGGATTATATGCTGGTTTACAACATGTGAAAAGAGGTGATGAATATGATGGAATTGGAGCCAATATAGGAGAAGCTATGGGAAGGTATATTCCACCATACATTATAGTTAGATATCTAATTGGTATTGTAGCTTTCATTGCACTATTGATCTACAAATGGAGAATAAGACATAAATCAATCTATGAAAATATTGAACATTTTTTGGAAGGAGATATCTTCATGCCTATAAGATACTCATACAAAGAAATAAAGCAAATGAGCCATGGTTTTAAAGAAAAATTGGGTCAAGGAGGGTTTGGTTTAGTGTATAAAGGAAAACTAAGAAGTGGGTCATTTGTAGCCATAAAAATGTTGAACAAATCAAAAGATGATGGGCAAGATTTCATTAGTGAAGTTGCAACCATAGGAAGAATACACCATGCAAATGTGGTAAGACTTATTGGATTTTGTGTTGAAGGTTCAACCAAAGCTCTTGTCTATGAATTCATGCCAAATGGGTCTCTTGATAAATATATTTTCTCAAAACAAGACAATGTTTTGTTAACATGTGAGAAAATGTATGAGATATCTCTTGGAGTGGCTCATGCTATTTCTTATCTACATAATGGTTGTGAGATGCAAATTTTACATTTTGATATCAAGCCTCATAACATACTTCTTGATGAGAACTTTGTCCCTAAGGTTTCGGATTTCGGGTTAGCGAAACTTTACCCTACTGACAAAAATGTTGTCACTGTGACCGGAGTAAGAGGGACACTTGGATACATGGCTCCGGAGTTGTATTACCACAACATTGGTGGAGTGTCGTATAAGGCTGATGTTTATAGCTTTGGGATGCTTTTGATGGAAATGGCAAGTAGAAGAAGAAATTTCATTTCCAGTGTAGAAAGTAATATAGAAAGTTCTGATCAACTTTACTTTCCTATGTGGATTTACGATGAACTTGATAAAGATAAAGATATAGAATTGGAGAATCTTACAAAGGAGGAAAATCGGGTAACAAAGAAGATGATTATAGTGGCACTTTGGTGTATACAATTAAAACCAAGTGATCGTCCTTCGACGAATAAAGTAGTAGAGATGCTTGAAGAAGAAAGTGAGAGTATTGAAATGCCACCAAAACCTTCTTTATATCCACAACAAAAGATCGAAGAAGATATAGAAAAGATCTCAGAGCAAACTCAATCAGATGATTCTACTTGTTCTACAAGTTATATTGAGTAA 2133 0.3376 MMNANEASFYSFYLHKHVSIFFITILLFFHQSSPSNNDPKLCPSSSCGKIHNISYPFRLKTDPNTCGDTRYELECHNNMTLLLTLFSGKYYVQDIDYKKYTIHVSDVGVIEDNICSFIPSYFLYEGSFGYNFIGPGINPFKLDDTMRISYFNCSNMIIDDDKYVNVDATPCGSRGHIYVVLDNSSNRNFSVKDIKIGCQLKVSTFANWTTIKYDKNKNNNVSYVDIHNMLVYGFRLSWLYVICEDKCGKGFECHVLDESIGEVQCNQDQLCPYVYDGPNKFTYNCGGSGIWYKIGDFIVGYAVGLYAGLQHVKRGDEYDGIGANIGEAMGRYIPPYIIVRYLIGIVAFIALLIYKWRIRHKSIYENIEHFLEGDIFMPIRYSYKEIKQMSHGFKEKLGQGGFGLVYKGKLRSGSFVAIKMLNKSKDDGQDFISEVATIGRIHHANVVRLIGFCVEGSTKALVYEFMPNGSLDKYIFSKQDNVLLTCEKMYEISLGVAHAISYLHNGCEMQILHFDIKPHNILLDENFVPKVSDFGLAKLYPTDKNVVTVTGVRGTLGYMAPELYYHNIGGVSYKADVYSFGMLLMEMASRRRNFISSVESNIESSDQLYFPMWIYDELDKDKDIELENLTKEENRVTKKMIIVALWCIQLKPSDRPSTNKVVEMLEEESESIEMPPKPSLYPQQKIEEDIEKISEQTQSDDSTCSTSYIE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0019 710 SUPERFAMILY Protein kinase-like (PK-like) 377 666 IPR011009 -
Lan8g0019 710 Pfam Wall-associated receptor kinase galacturonan-binding 42 106 IPR025287 GO:0030247
Lan8g0019 710 ProSitePatterns EF-hand calcium-binding domain. 214 226 IPR018247 -
Lan8g0019 710 MobiDBLite consensus disorder prediction 667 710 - -
Lan8g0019 710 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 693 IPR045874 GO:0004672
Lan8g0019 710 Gene3D Transferase(Phosphotransferase) domain 1 466 678 - -
Lan8g0019 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 511 523 IPR008271 GO:0004672|GO:0006468
Lan8g0019 710 Coils Coil 615 635 - -
Lan8g0019 710 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 10 693 - -
Lan8g0019 710 ProSiteProfiles Protein kinase domain profile. 391 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0019 710 ProSitePatterns Protein kinases ATP-binding region signature. 397 419 IPR017441 GO:0005524
Lan8g0019 710 Pfam Protein kinase domain 394 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g0019 710 Gene3D Phosphorylase Kinase; domain 1 368 465 - -
Lan8g0019 710 SMART serkin_6 391 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0019 Lan-Chr8 146191 150239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0019 43 696 Receptor kinase-like Gene Family AT5G38260 32.278 1.70e-100 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lan8g0019 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0019 - - gmx:100820366 701.049