Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0011 ATGGCACTAGATGAAGTTTCTACAAAATCAAAAGGGAAGTATCATGTGTTTTTGAGTTTTAGAGGAAAAGACACTCGCTTAAATTTCACTGACCACTTATATGAAGCCTTAAGGAGGAAAGGTATCATAACTTTTAGAGATGATGAAGAACTTGAAAGAGGTGAAAGTATCTCACAAAATCTCCTTGATGCAATTGAGGAATCTCTTATTGCAATTGTTATAATCTCCCAAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTACAAAAAATTGTTGATTGCAAACAAAGTTTGGGACTACAAGTATTCCCAATTTTCTATGGTGTAGATCCATCTCATGTAGGACATCAAAGGGAAAGTTTTGAACAAGCTTTCAAGGATCATGAACACAAATTTGAAGGAGACAAAGAGAAGGTGCAAAAATGGAGAGATGTACTCAAATATATTGCCAAATTATCTGGTTGGGACTCTAAAAATAAGCATGAATCAAAACTCATTGAAGAAATAGTTGAACAAGTATGGATGAAGCTGGAACCCAAATTAGCAATAAATACAGATGGATTGATTTCAATAGAAACAAAAGCAAATGATTTTATTTCACATTTAAGGTTGGGGTTGCAAGACACTCACCTTATAGGAATATGGGGTATGGGTGGCATTGGAAAAACAACATTAGCTGATGTTGTTTTCAACCGAATCAAAAGCAAATTTGATTTTACTTGCTTTCTTGCAAATGTTAGAGAGGCTTCTAATGAAGGGGATCAAGGTCTGATTAAATTACAAGATAAACTTCTTTCACAGTTGAAACCAAAGAGTATCATAATTAATACTTTAAGACAAGGAAAAGAGATGATAAAAAATCTTCTACAAAACAAAAAAGTTCTTCTGGTACTTGATGATGTGAATGCTGAAATTCAACTTGAATATCTGGTTGGAAACCAAAACTGGTTTGGTGGAGGGAGTAGAATAATAGTGACAACAAGGGATAAACATTTGTTGACTTCACATGGATTATTGCTTGCTATATATGAGATGAGACTCTTAAATGATCAAGAATCTCTTCTTCTCTTCTGTGAAAAAGCTTTTAATGGAAATCAACCATTGATAAGTTATTTGGAGTTGTCTAAAAAAGTAGTTGAATACACTGGAGGGCTTCCTTTGGCACTTAAAGTGTATGGTTCATTACTTCATGGAAGAAGTATACAAGAATGGGAAGACACTTTGATTAAGATACGCAGAGTTCCACCTGAAGATATCATTAACAAACTTAAAATAAGTTATGATATGTTGGAAGATGAGTACAAGACTATATTTTTGAATATTGTATGTTTCTTCAATGGATGGGAAAAAAAATATGTGACACAAATATTAGACAACTGTGGCTTGCATCCGACAATAGGAATAAAAGTTCTTATTGAAAAATCATTGATAACTTTTAATGCAGAACTTTGTCTAGGAATGCATGATTTGCTTGAAGAAATGGGTCAAAAAATTGTTATCCAAGAATCTCCTCTTGATCCTGGTAGACGTCAACTATTATGGTCTCTTGAGGATATTGATAAAGTATTGACAACAAATACAGGAACTGAGAAAATCCAAGGAATAGTTTTGAACCAAAGAATGGCATATGATGCACGTTGGCTACCTGATGCATTATCTAAAATGTTTAACATTAGATTACTCATCATATATTGTGATTTGCACCTTCAGTTTGATATCAAATGTCTTTCTAGTTCGTTAAATGTTGTTATTTGGTCTGGATATCCTTTGAAAGCTCTACCACTTGATGTGCAACTAGATGAACTTGTTTACTTGCAGATGTGCCACAGCAAAATAGAAAAGCTTTGGAATGGAACTCACTTTTTTTGGAATCTAAAACACATCAACTTATCATATTCTGAGGACCTAATTGAAACTCCAGATATTTCAGCATATACGGATGCTCAAAAGTTGAAAGACTTCCAAACAATATAA 1977 0.3343 MALDEVSTKSKGKYHVFLSFRGKDTRLNFTDHLYEALRRKGIITFRDDEELERGESISQNLLDAIEESLIAIVIISQNYASSTWCLDELQKIVDCKQSLGLQVFPIFYGVDPSHVGHQRESFEQAFKDHEHKFEGDKEKVQKWRDVLKYIAKLSGWDSKNKHESKLIEEIVEQVWMKLEPKLAINTDGLISIETKANDFISHLRLGLQDTHLIGIWGMGGIGKTTLADVVFNRIKSKFDFTCFLANVREASNEGDQGLIKLQDKLLSQLKPKSIIINTLRQGKEMIKNLLQNKKVLLVLDDVNAEIQLEYLVGNQNWFGGGSRIIVTTRDKHLLTSHGLLLAIYEMRLLNDQESLLLFCEKAFNGNQPLISYLELSKKVVEYTGGLPLALKVYGSLLHGRSIQEWEDTLIKIRRVPPEDIINKLKISYDMLEDEYKTIFLNIVCFFNGWEKKYVTQILDNCGLHPTIGIKVLIEKSLITFNAELCLGMHDLLEEMGQKIVIQESPLDPGRRQLLWSLEDIDKVLTTNTGTEKIQGIVLNQRMAYDARWLPDALSKMFNIRLLIIYCDLHLQFDIKCLSSSLNVVIWSGYPLKALPLDVQLDELVYLQMCHSKIEKLWNGTHFFWNLKHINLSYSEDLIETPDISAYTDAQKLKDFQTI* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0011 658 SMART till_3 13 153 IPR000157 GO:0007165
Lan8g0011 658 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 156 IPR035897 -
Lan8g0011 658 Pfam TIR domain 13 184 IPR000157 GO:0007165
Lan8g0011 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Lan8g0011 658 Pfam Leucine Rich Repeat 603 620 IPR011713 -
Lan8g0011 658 PRINTS Disease resistance protein signature 212 227 - -
Lan8g0011 658 PRINTS Disease resistance protein signature 289 303 - -
Lan8g0011 658 PRINTS Disease resistance protein signature 383 397 - -
Lan8g0011 658 PRINTS Disease resistance protein signature 621 637 - -
Lan8g0011 658 Gene3D - 183 338 IPR027417 -
Lan8g0011 658 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 632 - -
Lan8g0011 658 Gene3D - 348 432 IPR042197 -
Lan8g0011 658 Gene3D - 11 182 IPR035897 -
Lan8g0011 658 SUPERFAMILY L domain-like 546 644 - -
Lan8g0011 658 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Lan8g0011 658 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 632 IPR044974 GO:0006952
Lan8g0011 658 Pfam NB-ARC domain 208 415 IPR002182 GO:0043531
Lan8g0011 658 SUPERFAMILY "Winged helix" DNA-binding domain 419 524 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0011 Lan-Chr8 76138 82943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0011 10 652 WRKY Transcription Factor Family AT4G12020 29.061 3.61e-72 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0011 - - mtr:MTR_3g080470 810.061