Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1433 ATGTCCGGGTCTACTTCACGGCTTCATGCAGATACTGTTTCTGTCCACTTTCCTCTGTGTTCTCTTTGCCAAAAGGCCTTATCACCTGATAATGAGATAACTGGTGATCTTCCAACCAATGGTGTATGTAGTGATTGTAAGTTTTTATTACTTGAAGACTTCGGGAATCATCAAAGAAGGCACAGAGGAAGATTCAGGCACAACAGTTCTGAATCAGTTGAGAATATTCTGTCACAACCGCTATCATATATGGTGAGACAAAACCAATCCACTTCGTCTGTGGAGGATAATCAAGTTGTGGATGGCGATGCCCCTGCTTGGTCTTTGCAGTATGGGAGTACCCATACTACCCCTAGTGGGTCTAGAAGCTGGAGACGAGTTCTCTCAGATACTGACAGTGATGGTTTTGATAATTGGGCCCCTCTTTATGACGAAAGTGAATCAAATGTAAGTTTTAGGCGGTATAGGATTCCTCATGCTGAGACTGATTCTTTCTCTTTCAGTGCTTATGGAGGTGACTCTGATATCTCGATGGATAGACATAGTTTTGTAGGTACAGATATGTTTAATTTACGAGATGAGGCTGATGAGTTGGATAGTGACACTGATATAGATCCAATGCATGCTGGCCTCAGCCAATGGAACATAGAAGACGATGAGGAAGAAGATGAGGAGGGGGATGAAGAAGAGGAAAGGGAATGGGAACTAGCTGAGGAAGAGGAAGCTGAGGCCACCACTCGCCTTCAAAACGTTTTCACCCGGAGTCCAAGTGAGAGCAGGCGTGGCATTAATTGGGAACAAAGGTTTAATTCAACTGTTGAGGGAATAATTAACCAGAGAATCAGGGATAGCTGGCGAGTAGCGTACAACAATGATCACAACAGCTTCACTAACTTGGATGACACTGATTTACTACCTCCTTATCAAAGGGCAAACTCTGGGGATTATCTTGATGCTAGAAACTTCGAGGAACTGCTAGAGCATCTTGCTGAGAATGACAACACAAGAAGAGGAGCACCTCCTGCAGCTTTGTCATTCGTGAGTAATCTGCCTCTCGTAGTCATCAGCAAGGAGGAACATGAGAAGCATGGTGAAGAACTAATTTGTGCTATTTGCAAGGATGTCTTGGCCCCTGGCACCAAAGTAAACCAGCTTCCATGTTCTCACCTGTATCATACCTGCTGCATTTTGCCGTGGTTGAGTGCGCGAAATTCGTGCCCTCTCTGTCGTTATGAGCTACCAACCGACGATAAGGATTACGAAGAGGGGAAGCAGAATAACATTAATAGTAGATACATGATCCATGATGTGATGGAGGATGATAGTTCCCCTGATGTTTTTGATGAAGCTGAAATGAATGAAGAGGACAGTGGGGTACAGCCGCGAGAACCTGTGAGTTCAGGTTCTAGCGTGAATTCTTCTGCAACAAGAGGTGATGGAAGATGGTTTTTTCTTGCTGCAGCTCCGATTGTTAGTCTTGTGGGCATTGTTCTTGTCTTTTGGTTAGGTAATAATCCTCAGAATCAGATTGAAGGGAGTAGAAATCTGAGTGGTCACAGCTTATCTGGGCAAAATCACCATGAGCTTCATGTTTATGCCTCGGCCGATCAAAGGGAGAGTAGAAGCAGAAGATGGTGGTGTCCATTCTAA 1650 0.4442 MSGSTSRLHADTVSVHFPLCSLCQKALSPDNEITGDLPTNGVCSDCKFLLLEDFGNHQRRHRGRFRHNSSESVENILSQPLSYMVRQNQSTSSVEDNQVVDGDAPAWSLQYGSTHTTPSGSRSWRRVLSDTDSDGFDNWAPLYDESESNVSFRRYRIPHAETDSFSFSAYGGDSDISMDRHSFVGTDMFNLRDEADELDSDTDIDPMHAGLSQWNIEDDEEEDEEGDEEEEREWELAEEEEAEATTRLQNVFTRSPSESRRGINWEQRFNSTVEGIINQRIRDSWRVAYNNDHNSFTNLDDTDLLPPYQRANSGDYLDARNFEELLEHLAENDNTRRGAPPAALSFVSNLPLVVISKEEHEKHGEELICAICKDVLAPGTKVNQLPCSHLYHTCCILPWLSARNSCPLCRYELPTDDKDYEEGKQNNINSRYMIHDVMEDDSSPDVFDEAEMNEEDSGVQPREPVSSGSSVNSSATRGDGRWFFLAAAPIVSLVGIVLVFWLGNNPQNQIEGSRNLSGHSLSGQNHHELHVYASADQRESRSRRWWCPF* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1433 549 MobiDBLite consensus disorder prediction 198 232 - -
Lan7g1433 549 PANTHER OS06G0101300 PROTEIN 307 462 - -
Lan7g1433 549 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 307 462 - -
Lan7g1433 549 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 327 416 IPR013083 -
Lan7g1433 549 ProSiteProfiles Zinc finger RING-type profile. 369 410 IPR001841 -
Lan7g1433 549 MobiDBLite consensus disorder prediction 450 474 - -
Lan7g1433 549 MobiDBLite consensus disorder prediction 460 474 - -
Lan7g1433 549 MobiDBLite consensus disorder prediction 216 232 - -
Lan7g1433 549 SMART ring_2 369 409 IPR001841 -
Lan7g1433 549 SUPERFAMILY RING/U-box 359 416 - -
Lan7g1433 549 Pfam Ring finger domain 369 410 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1433 Lan-Chr7 19756949 19759785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1433 20 549 C3H Transcription Factor Family AT5G01980 43.431 8.44e-116 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1433 - - pvu:PHAVU_008G078700g 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1433 7 19756949 19759785 Lan11g1592 11 30698199 30701715 LSH
Lan7g1433 7 19756949 19759785 Lan13g1222 13 17778023 17781004 LSH