Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1421 ATGGGGTGCTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCAGATCGCATATGTAAAACGCGTAAGCCATAATGACAATGTACCAACCGTGCTGCCTAAACCTCAGACTCATACTCGATCACTCCAATCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCAATTCAAACTGTTAAAAAAATCAACAACAATAGAGCACGAGCATTATCTGCTCCGTCAACTCTTGATGCAGCAGAACAAGATGCATTAGCCTCAGTTGAGTATGAGGACCAAGAAAAGCCAAAACACCAAACCGGGGCAATGAAGGAGCAACAGTCGTCTACTCCACATCCTCTACCACTTCCTTCACCTCAGGGCGGTGCGGCTTTGAAGGCTATGGGCAGCTTTAAGTCTGTGACAGCCAGTGGTCCTCTATCTGCTTCCGGACCTTTGCCGCTTCCACCTACAGGTTCACTTCGGAACTTTCAGTATGACGAAATAGCTGCTGCTTGCCTTAATTTCTCTTCAGATCGATGCATGTCGGAATGTCTTTCTTCCACCATATATAAAGCTTCCTTTGGTGATGATGTTTCAAGTTCAAAGAGGTTTGAAGCGACTGTCACACGCCTTCACCCATCAACTCAGGGGTTGAAGGAATTTATGAATGAGGTTAATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTAGGATTTCATGCACGTGATGGTTCAGAGCAGAGATTGTTGGTGTATGAAAGGCTATACCATGGAAGCTTGGACCGCCTGTTGTATGGGAGATCTGATGGCCCGTCAATTGATTGGAATTCAAGAATTAAAATTGCTAAGTGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAGTTTTCAACAGCCAACATACAAATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGCCGGACATATTCCCAATGAAGAGATTTCAAGCAGTTCTTCTGCTGTCGGAAACCTGTCAATCGAGACACTGGAGAAAGGGATGCTTACTCCAAAGAGCAATGTATGGAGTTTCGGAATTTTTCTTCTGGAGCTACTTACCGGAAGAAAGAATCTCGATAGCCGTCATCCCAAGGAAGAGAGGAACTTAGTCAAGTGGAGCTGGCCTTTCCTAGCCGACGAATATCGGCTGTCTTTGATCATGGACCATCAACTTAAAGGTCGCTTTCCAGCCAAGGCGGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAAAGGCCTACCATGAGAACTGTTGTTAAGCATCTCAAGATGATCCAAGATGTCAAGTACTCATGCCGGTTCCCATTGCAGGAGCCAGCAGCAATATCTGGAAAACATATGTGGAGATCACCAAGTCTTAATGGTATCATCTGCCCTGTACCTAGGTTGAGTTTCTCTCCATCACCGCCATCATCGGGAACACTACTTTCGGTTTCACCTCCAAGATGGTCAGGAGTGCCTATAGTCCTTCCTCCAAGAGCTTGTTTGAAAGAGCTTGATAGGCAAGAAAGCAGAAAGTCATCATCTTCAGCCTCAAGGAGGCCTAGTGTTGAAGGATTTTGA 1629 0.4481 MGCFTVLKSKKKKSDQIAYVKRVSHNDNVPTVLPKPQTHTRSLQSAPPSFRTRVKPIQTVKKINNNRARALSAPSTLDAAEQDALASVEYEDQEKPKHQTGAMKEQQSSTPHPLPLPSPQGGAALKAMGSFKSVTASGPLSASGPLPLPPTGSLRNFQYDEIAAACLNFSSDRCMSECLSSTIYKASFGDDVSSSKRFEATVTRLHPSTQGLKEFMNEVNTLASLQHPNLCKLLGFHARDGSEQRLLVYERLYHGSLDRLLYGRSDGPSIDWNSRIKIAKCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCAGHIPNEEISSSSSAVGNLSIETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSWPFLADEYRLSLIMDHQLKGRFPAKAARTIADIAQRCLQKEPSERPTMRTVVKHLKMIQDVKYSCRFPLQEPAAISGKHMWRSPSLNGIICPVPRLSFSPSPPSSGTLLSVSPPRWSGVPIVLPPRACLKELDRQESRKSSSSASRRPSVEGF* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1421 542 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Lan7g1421 542 MobiDBLite consensus disorder prediction 521 542 - -
Lan7g1421 542 Pfam Protein tyrosine and serine/threonine kinase 184 444 IPR001245 GO:0004672|GO:0006468
Lan7g1421 542 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Lan7g1421 542 SUPERFAMILY Protein kinase-like (PK-like) 147 455 IPR011009 -
Lan7g1421 542 PANTHER OS01G0588500 PROTEIN-RELATED 45 541 - -
Lan7g1421 542 MobiDBLite consensus disorder prediction 27 49 - -
Lan7g1421 542 MobiDBLite consensus disorder prediction 30 49 - -
Lan7g1421 542 MobiDBLite consensus disorder prediction 90 124 - -
Lan7g1421 542 PANTHER OS01G0822200 PROTEIN 45 541 - -
Lan7g1421 542 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1421 Lan-Chr7 19702440 19706458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1421 141 450 Receptor kinase-like Gene Family AT4G02010 36.825 9.78e-55 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lan7g1421 PK_Tyr_Ser-Thr 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1421 - - gmx:100808712 895.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1421 7 19702440 19706458 Lan11g1650 11 32130113 32134039 LSH
Lan7g1421 7 19702440 19706458 Lan13g1198 13 17604508 17608446 LSH
Lan7g1421 7 19702440 19706458 Lan12g0177 12 2566117 2569155 PCT
Lan12g0177 12 2566117 2569155 Lan7g1421 7 19702440 19706458 PCT