Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1419 ATGAGTTTCAGAGACAGGAACCTAAGAGAAGGGAAGGAATGTGAAGAATCAAAATCAGTGAGTCAAAATGGATCAGTGACAACAACTCAGCTAACAATTGATGAGAGTCTTCTGGTTGATCCTAAGTTACTGTTTATTGGCCATAAGATTGGTGAAGGAGCTCATGGAAAAGTTTACGAAGGACGGTATCGAGATCAAATTGTTGCAATTAAAGTTCTGCATCGTGGGAGCACTTCGGAAGAAAGTGCAGCACTTGAAAATCGTTTTGCTCGGGAAGTTATAATGATGTCCCGTGTCCATCATGATAATCTTGTTAAGTTCATTGGGGCTTGCAAGAATCCACTTATGGTGATAGTTACTGAGCTATTACCGGGGATGTCACTGCGCAAATATTTAATGAGTATCCGTCCTAAACTAATAGAACTTCATGTTGCTATAAACTTTGCCCTCGATATTGCTCGGGCAATGGATTGGCTGCACGCCAATGGAATCATACATAGAGATCTAAAACCCGACAATCTATTGCTTACGGCAAATCAGATGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTAACTGAGATGATGACTGCAGAAACCGGAACTTACCGTTGGATGGCACCGGAGTTGTACAGCACAGTGACATTGCGTCAAGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTGTATAGTTTTGGAGTTGTTTTGTGGGAATTACTAACAAACCGCATGCCTTTTGAAGGGATGTCTAATTTACAGGCTGCATATGCTGCTGCATTTAAGCAAGCTAGGCCTAGCATTCCTGATGATATATCTCCCGACCTCGCGTTTATCATACAATCATGCTGGGTTGAAGAACCTAACATGAGACCAAGTTTTAGTCAGATCATCCGCATGCTCAACGCATTTCTCTTCACACACTCACCCCCTTCTCCTTTTCCAGTAGAACCTGACAATGACAAACCTGAGGCATCAGCAACAGCGAGTAATGGTACCATTACCGAGTTTTCTGCCCGTAACAAAGGAAAGTTTGCTTTTCTTCGCCATTTGTTTTCTTCAAGGAGGACCAAAAACTAA 1092 0.4203 MSFRDRNLREGKECEESKSVSQNGSVTTTQLTIDESLLVDPKLLFIGHKIGEGAHGKVYEGRYRDQIVAIKVLHRGSTSEESAALENRFAREVIMMSRVHHDNLVKFIGACKNPLMVIVTELLPGMSLRKYLMSIRPKLIELHVAINFALDIARAMDWLHANGIIHRDLKPDNLLLTANQMSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGVVLWELLTNRMPFEGMSNLQAAYAAAFKQARPSIPDDISPDLAFIIQSCWVEEPNMRPSFSQIIRMLNAFLFTHSPPSPFPVEPDNDKPEASATASNGTITEFSARNKGKFAFLRHLFSSRRTKN* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1419 363 Pfam Protein tyrosine and serine/threonine kinase 46 305 IPR001245 GO:0004672|GO:0006468
Lan7g1419 363 SUPERFAMILY Protein kinase-like (PK-like) 41 327 IPR011009 -
Lan7g1419 363 MobiDBLite consensus disorder prediction 1 17 - -
Lan7g1419 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lan7g1419 363 MobiDBLite consensus disorder prediction 1 25 - -
Lan7g1419 363 CDD STKc_MAP3K-like 50 305 - -
Lan7g1419 363 ProSiteProfiles Protein kinase domain profile. 44 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1419 363 PRINTS Tyrosine kinase catalytic domain signature 120 133 IPR001245 GO:0004672|GO:0006468
Lan7g1419 363 PRINTS Tyrosine kinase catalytic domain signature 158 176 IPR001245 GO:0004672|GO:0006468
Lan7g1419 363 PRINTS Tyrosine kinase catalytic domain signature 232 254 IPR001245 GO:0004672|GO:0006468
Lan7g1419 363 PRINTS Tyrosine kinase catalytic domain signature 276 298 IPR001245 GO:0004672|GO:0006468
Lan7g1419 363 ProSitePatterns Protein kinases ATP-binding region signature. 50 71 IPR017441 GO:0005524
Lan7g1419 363 Gene3D Phosphorylase Kinase; domain 1 32 123 - -
Lan7g1419 363 PANTHER SERINE-THREONINE PROTEIN KINASE 1 339 - -
Lan7g1419 363 Gene3D Transferase(Phosphotransferase) domain 1 127 326 - -
Lan7g1419 363 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 339 - -
Lan7g1419 363 MobiDBLite consensus disorder prediction 316 337 - -
Lan7g1419 363 SMART serkin_6 44 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1419 Lan-Chr7 19691589 19695194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1419 32 363 MAP Kinase Kinase Kinase AT5G01850 71.709 4.64e-180 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan7g1419 PK_Tyr_Ser-Thr 1.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1419 - - gmx:100816708 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1419 7 19691589 19695194 Lan13g1196 13 17589156 17593588 LSH