Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1405 ATGGGAGGGTGTTGTAGCCATGATGTTACTATTAGAGGCAAGGTTGAAAGTGAAGTGGATGATGGAGAATATGAAAATAGCACTCATGTCACATATGAACGTGATGGATCAAGGGTTATGTTAAAAGGATCCTCTATGTTTGTATCAATGAATAGCCAACAGGGTAATAAAGGTGTCAATCAAGATGCAATGACAGTTTGGGAAGACTTCACTGGAGAAAAACATATGGTATTTTGTGGTGTATTCGATGGTCATGGTCCTCTAGGGCACAAGGTTTCACAATACATTCGTGACAAGCTACCCTTAAAACTATCTGAAGCAATAAAAATGTCACAACATAAGGCATGCAGATTTTATGATGCTAATGAAGATATATATGATGATGATGAGAATAACCAAAGTATGTCTCTTGCTGCATGGGAAGGATGCTTTCTAAAGTCCTTTGATCAAATTGATCAACACCTTGCTCAGGAAATTAATATTGATACCTATTGTAGTGGTAGCACTGCTGTAACTCTCATTAAACAGGGTGATCAACTTATAGTTGGTAATTTGGGTGATTCTCGAGCAGTTCTTTGCACAAGAGGGGATAGAAATCAACTTATTCCTATTCAACTTACTGTTGACTTGAAACCTGATATTCCAAGTGAAGCTTCAAGAGTGATTAGCTATAAAGGAAGAATATTTGCAGGAGAAGAAGAACCAGATGTGTATAGAATATGGATGCCTGATGATGATTGCCCTGGACTAGCCATGTCAAGAGCCTTTGGAGACTTTTGTCTAAAAGATTATGGCCTTATTTCAGCTCCTGATGTCTTTTATAGAAAACTCACAAAACAAGATCAATTTGTTGTTTTGGCAAGTGATGGGGTATGGGATGTGCTCACTAACAGTGAAGTAATAAACACTGTTGCTTCAGCACCAAGGAGATCCATAGCAGCGAAAACCCTAGTAAAGTGCGCGGTTCGAGCATGGCGATACAAGTATCCCGGTTCGAAGGTTGATGATTGTGCAGCCATATGCTTGTTTGTTGATGACAACCCTGTGTTGTCTCAATCTCAATCCCAAACCAACAAGAACTTTAACCATGGAAGTCATAGAAATCACAGCAAGAACCAATTTCGTCGCTCGAAATCGACTAGAAATGAAGACACTGAAACTGTTGATGGCAAAGTTGGTTTAGAACTTAATCAAGAATGGAAAGCTCTTGGAGGGTTAGTTAGATCCAACTCAATATCAAAACTTCCAAGGATAACAAAGAACATGAGTAAACACCAAGCATCAAAATACTATAATGAGAGTTAG 1305 0.387 MGGCCSHDVTIRGKVESEVDDGEYENSTHVTYERDGSRVMLKGSSMFVSMNSQQGNKGVNQDAMTVWEDFTGEKHMVFCGVFDGHGPLGHKVSQYIRDKLPLKLSEAIKMSQHKACRFYDANEDIYDDDENNQSMSLAAWEGCFLKSFDQIDQHLAQEINIDTYCSGSTAVTLIKQGDQLIVGNLGDSRAVLCTRGDRNQLIPIQLTVDLKPDIPSEASRVISYKGRIFAGEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISAPDVFYRKLTKQDQFVVLASDGVWDVLTNSEVINTVASAPRRSIAAKTLVKCAVRAWRYKYPGSKVDDCAAICLFVDDNPVLSQSQSQTNKNFNHGSHRNHSKNQFRRSKSTRNEDTETVDGKVGLELNQEWKALGGLVRSNSISKLPRITKNMSKHQASKYYNES* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1405 434 Gene3D - 35 345 IPR036457 -
Lan7g1405 434 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 1 406 - -
Lan7g1405 434 MobiDBLite consensus disorder prediction 353 390 - -
Lan7g1405 434 SMART PP2C_4 37 342 IPR001932 -
Lan7g1405 434 Pfam Protein phosphatase 2C 50 318 IPR001932 -
Lan7g1405 434 CDD PP2Cc 46 344 IPR001932 -
Lan7g1405 434 PANTHER ALPHABET, ISOFORM E-RELATED 1 406 - -
Lan7g1405 434 MobiDBLite consensus disorder prediction 376 390 - -
Lan7g1405 434 SUPERFAMILY PP2C-like 39 346 IPR036457 -
Lan7g1405 434 ProSiteProfiles PPM-type phosphatase domain profile. 47 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1405 Lan-Chr7 19567026 19571424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1405 1 348 PP2C-type Phosphatase Gene Family AT5G01700 51.714 5.22e-127 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1405 - - gmx:100783603 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1405 7 19567026 19571424 Lan11g1667 11 32581800 32585508 LSH
Lan7g1405 7 19567026 19571424 Lan13g1172 13 17272110 17274980 LSH