Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1400 ATGGGCAATAATAATTTGCATGTTAAGGATTTTTGCACATACCCTTTTCATATTTTGGTCTCTTGTTCCAATATATTTACTCAATGTTGCAATATAGCTGAATCTAGAAGGAAAAAATGCAGTTTTTTGTACTTTGCATTGTTTTTGCAAGTTCTTGTTTCTTGTACTTTTGTAACAGGACACAACTTGTTTGATGGAGTGACTGTGACAAAATCAGATTATCATGCATTAAGGGCACTGAAGCATGAACTTATAGACTTCAAAGGGGTTCTTAGAAGCTGGAATGAGAGTGGTTTTGGTGCATGTTCAGGTTCATGGGTAGGTATCAAATGTGTGAATGGAAATGTTATTGCAATTCAGCTTCCTTTTAAAGGTTTAGGTGGAAAAATCTCTGAGAAAATTGGGCAACTTCAATCTTTAAGGAAGATTAGTCTTCATGATAATCTTCTAACTGGTCCTATCCCTTATTCTCTTGGATTTCTTCCTAATCTTAGAGGTCTTTATCTCTTCAATAACAAGCTTTCAGGTTCTATTCCTCCTTCTATTGGTAATTGCTTAATGCTTCAATCTCTTGATGTTAGCAATAACTTACTTATTGGTAAAATCCCTCATAGTTTATCAAACTTTACTAGGATATATAGGATCAATTTGAGCTTCAATTCACTTTCTGGATCTATTCCTAGTAGTATCACTATGTCTCCTTCACTTACTATTCTTGCATTACAATATAACAATCTTTCTGGTTCTATACCAAGTTATTGGGGTGGAATGGGAAAAAACAAAGGTTTTGGTTCCAAACTTCAGGTTTTGACACTTGATCATAATCTTATTTCTGGTACTATTCCAGTTTCTATAAGCAAGTTGAGTTTGGTTGAGAACATTTCTTTAAGTCATAACAAGATTGTAGGGTCTATTCCAAGTGAACTACATGCACTTTCAAGGCTTAGATTTCTTGATCTATCAAACAATGACATAAATGGCAGCATTCCTAAAACATTCTCCAACTTAGCTTCTCTTGTTTCATTGAACTTAGAAGGAAACAAACTTGAAAATCATATACCAGATAGTTTGAACAGATTGCATAATCTTTCTGTGCTTAACCTCAAGAACAATAAGCTTGATGGCAAAATCCCTTCAACAATAGGGAATATCAAAGGCATCACCAAAATTGATCTCTCAAAAAATAAACTATTTGGAGAAATTCCTCATTCTTTTGCTAAACTTGCAAAGTTAAGTTTTTTCAATGTCTCTTACAATAATCTTTCTGGTCCTGTCCCTTATGTCCTTACCAAAAGATTCCATTCAAGTTCCTTCACAGGGAATCTTAAACTATGTGGATTTATTGCATCAAAACCATGTCCTTCACCCTCACCTCAGATTCTTCCATCTCCAACACAAAACCGTTCTTCTAAGCAACATCATCATCATAAATTAAGCACCAAGAGCATACTCCTAATAGCAGCAGGTATTATCATCATAATCCTGTTAGTAACATGCTGCTTATTATTGTGTTGTTTGGTTAAGAAAAGGGGTGATTCAAAAGGAAATAATGGTAAGGCAAAAGCAGCAGCATCGGCTACAATTATCGAAAAAGGCGGCGGCGGTGTTGGTGGAATAGAATCGTCGGGAGGTGAAGCTGGTGGGAAACTAGTTCACTTTGATGGACCATTTGTGTTTACAGCTGATGATCTTCTATGTGCAACTGCTGAGATAATGGGAAAAAGTCCATATGGAACAGCATATAAAGCAACATTGGAAGATGGAAACCAAGTTGTTGTTAAGAGGTTGAGGGAGAAGAGTACTAAAGGGCAGAAGGAGTTTGAAACCGAGGCGGCTTCACTCGGAAAAATCAGACACCAAAATCTGTTGGCACTTAGAGCTTACTATTTAGGACCAAAAGGAGAGAAGCTGCTTGTCTTTGATTACATGACCAAAGGAAGCTTAGCATCATTCCTTCATGCTAGGGGACCTGAAACTGTGATTGAGTGGCCAACAAGAATGAACATAGCAATTGGAATAACACATGGTTTATACCATCTCCATAAGGAAGAGAATATAGTACATGGAAATCTTACATCTAGCAATATACTATTAGATGAGCAAACAAATCCTCACATTACAGATTTTGGACTTTCAAGGCTAATGACAACTTCTGCAAGCACAAACATCATTGCTACTGCAGGAAATCTCGGATATAATCCACCCGAACTTTCGAAGACTAAGAAGCCTAATCAAAAGAGTGATGTTTATAGCCTTGGTGTTATCATTTTGGAGCTCCTAACTGGTAAACCACCAGGTGAGACAAGTAATGGTATGGAATTGCCTCAATGGGTGGCATCAATAGTAAAGGAAGAATGGACAAATGAAGTATTTGATTTGGAACTAATGAGGGATGCAACAACTATAACTGATGAACTACTTAATACATTGAAATTAGCACTTCATTGTGTTGATCCTTCTCCATCAGCAAGACCAGATATTCAACAAGTTCTTCATCAATTGAACCAAATCAAGCCTCAGTTACTTGCAGCTCATGATGATGAGTAA 2547 0.3659 MGNNNLHVKDFCTYPFHILVSCSNIFTQCCNIAESRRKKCSFLYFALFLQVLVSCTFVTGHNLFDGVTVTKSDYHALRALKHELIDFKGVLRSWNESGFGACSGSWVGIKCVNGNVIAIQLPFKGLGGKISEKIGQLQSLRKISLHDNLLTGPIPYSLGFLPNLRGLYLFNNKLSGSIPPSIGNCLMLQSLDVSNNLLIGKIPHSLSNFTRIYRINLSFNSLSGSIPSSITMSPSLTILALQYNNLSGSIPSYWGGMGKNKGFGSKLQVLTLDHNLISGTIPVSISKLSLVENISLSHNKIVGSIPSELHALSRLRFLDLSNNDINGSIPKTFSNLASLVSLNLEGNKLENHIPDSLNRLHNLSVLNLKNNKLDGKIPSTIGNIKGITKIDLSKNKLFGEIPHSFAKLAKLSFFNVSYNNLSGPVPYVLTKRFHSSSFTGNLKLCGFIASKPCPSPSPQILPSPTQNRSSKQHHHHKLSTKSILLIAAGIIIIILLVTCCLLLCCLVKKRGDSKGNNGKAKAAASATIIEKGGGGVGGIESSGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSPYGTAYKATLEDGNQVVVKRLREKSTKGQKEFETEAASLGKIRHQNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPETVIEWPTRMNIAIGITHGLYHLHKEENIVHGNLTSSNILLDEQTNPHITDFGLSRLMTTSASTNIIATAGNLGYNPPELSKTKKPNQKSDVYSLGVIILELLTGKPPGETSNGMELPQWVASIVKEEWTNEVFDLELMRDATTITDELLNTLKLALHCVDPSPSARPDIQQVLHQLNQIKPQLLAAHDDE* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1400 848 Gene3D Ribonuclease Inhibitor 262 459 IPR032675 -
Lan7g1400 848 Pfam Protein tyrosine and serine/threonine kinase 570 834 IPR001245 GO:0004672|GO:0006468
Lan7g1400 848 ProSiteProfiles Protein kinase domain profile. 566 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1400 848 SUPERFAMILY Protein kinase-like (PK-like) 570 838 IPR011009 -
Lan7g1400 848 CDD STKc_IRAK 572 837 - -
Lan7g1400 848 Gene3D Ribonuclease Inhibitor 187 261 IPR032675 -
Lan7g1400 848 Gene3D Ribonuclease Inhibitor 72 186 IPR032675 -
Lan7g1400 848 Gene3D Transferase(Phosphotransferase) domain 1 644 846 - -
Lan7g1400 848 Pfam Leucine rich repeat 362 421 IPR001611 GO:0005515
Lan7g1400 848 Pfam Leucine rich repeat 266 325 IPR001611 GO:0005515
Lan7g1400 848 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515
Lan7g1400 848 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 25 844 - -
Lan7g1400 848 Gene3D Phosphorylase Kinase; domain 1 572 643 - -
Lan7g1400 848 Pfam Leucine rich repeat N-terminal domain 71 111 IPR013210 -
Lan7g1400 848 SMART LRR_typ_2 336 360 IPR003591 -
Lan7g1400 848 SMART LRR_typ_2 161 185 IPR003591 -
Lan7g1400 848 SMART LRR_typ_2 312 335 IPR003591 -
Lan7g1400 848 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 25 844 - -
Lan7g1400 848 SUPERFAMILY L domain-like 90 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1400 Lan-Chr7 19523338 19527276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1400 64 839 Receptor kinase-like Gene Family AT3G51740 65.256 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan7g1400 PK_Tyr_Ser-Thr 3.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1400 - - gmx:100799290 1179.85