Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1389 ATGACCCGTTTACCCATTTGGGTCATTCTCTGTTTCATTTCAACGTTGTTGTTGTTGTTGTTGGAAGCTAAAACCTTTGACCCATACAAGGTTCTTGGGGTTGATAAAAATGCAAGTCAGCGAGAAATTCAGAAGGCTTTCCACAAGCTCTCTCTTCAGTACCATCCTGATAAGAACAAGAACAAGGGTGCACAAGAGAAGTTCTCTCAGATCAATAATGCGTATGAGATTCTATCTGATGAGCAGAAGAGGAAGAATTATGACATGTATGGCGATGAGAAAGGAAATCCTGGATTTGAAGCTGGCCATCATGGATATCAAGGTGGAAATACTTATTTCACGGGTGGTGGACCGGGGGGCTGGCAGGGTATGGGTGGGCAGGAAGGCTCTAAGTCATTCTCCTTCTCATTCGGCGGTGGTCCTGGTGGCTCAAATTCTTTTGGATTTGGTTTGGGTGATATTTTTAGCAGTTTTTTTGGTGGAGGTGGTGGTGGGAGTCGGTTTGGTGGAGGTGGTGGCGAGAGTCGATTTGGTGGTTTTGGCACTTCGACTGGTTCTCAATCTAAGTCCAAAAGTTCCACCAAAACTTTTAGAGCCATAAATTCGAATATATACCAGAAAGAAATAGCCGATCGAGGGATGACTTGGCTTTTATTATGTTATACACACTCATCGAAGGGGGTCCAATACTTTGAATCCACTGTAGAGGAGGTTGCCAATTCATTGCAAGGAGCTTTAAAGGTAGGAAGCATTAATTGTGAAAAGGAAGCCTCGTTCTGTAAGGAGCTTGGTGTATATCTGGGCAGAAGTCCGAGGCTTTTTGTTTATTCTTACAAGGCGAACGGAAAGGGCTCTTTAGTGGAGTACGATGGTAACTTAGCTGTTAAGGATTTGAAGGCTTTCTGTCAAGAAAACTTGCCAAGGTTTTCAAAACGAACCGACCTGAATTCTCTTGATCAATTTAGCACTACTGGAAAGTTGCCAAGGGTGATGCTTCTCTCAACCAAGAAGAACACTCCTGTAATCTGGCGTGTTCTTAGTGGCTTGTATCACAAACGCTTTACTTTCAGTGATGCAGAGGTTCATGATGTTTCCGATCCGAAAGTGAAAAAGCTAGGAGTTGATGCACTTCCAGCTATGGTAGGATGGACACATAATGGAGAGAAGCATATTCTGAAAACAGGAATTTCTGTAAATGATATAAAGTCTGCAGTTTCTGATCTTAGTAGTGTACTTGATAATTTCGAAAAAACTTGTAAAAAAAAAGCATCAGGTCAAGGCAAGAAGGAACAAACAGATTCAGATGATGGACCAATACAGTTGCTTTCACAGTCTAACTTTGAGGTTCTTTGTGGTCAGAAAACTCCACTCTGCATAATTGGTGCTTTTAGATCTTCTAAAGCTAGAGAAAAGCTAGATTCAGTTCTCTCTGTGGTATCTAAAAAGTCATTATCAAGAAGACCAAATGAAGGAGCCAGTTCTAGAGACTCAATCTCTTATGCACTCTTAGATGCTGCAAAACAACAATCATTTCTAAATGGATTGAACAAAAAAGGGTATAAATCATCAGAAAAGTTGTTGATTGCATACAAGCCTAAAAGAGGAAAGTACACTGTATTCAAAGGTGAAATGGCAATAGAAGAAGTAGAGAGTTTCATTAGTTCAGTTCTCAGTGGAGATATAGAATTCAGGGAAACACATGAGAAGAAACCTCTACTCAAATAG 1725 0.4081 MTRLPIWVILCFISTLLLLLLEAKTFDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKNKGAQEKFSQINNAYEILSDEQKRKNYDMYGDEKGNPGFEAGHHGYQGGNTYFTGGGPGGWQGMGGQEGSKSFSFSFGGGPGGSNSFGFGLGDIFSSFFGGGGGGSRFGGGGGESRFGGFGTSTGSQSKSKSSTKTFRAINSNIYQKEIADRGMTWLLLCYTHSSKGVQYFESTVEEVANSLQGALKVGSINCEKEASFCKELGVYLGRSPRLFVYSYKANGKGSLVEYDGNLAVKDLKAFCQENLPRFSKRTDLNSLDQFSTTGKLPRVMLLSTKKNTPVIWRVLSGLYHKRFTFSDAEVHDVSDPKVKKLGVDALPAMVGWTHNGEKHILKTGISVNDIKSAVSDLSSVLDNFEKTCKKKASGQGKKEQTDSDDGPIQLLSQSNFEVLCGQKTPLCIIGAFRSSKAREKLDSVLSVVSKKSLSRRPNEGASSRDSISYALLDAAKQQSFLNGLNKKGYKSSEKLLIAYKPKRGKYTVFKGEMAIEEVESFISSVLSGDIEFRETHEKKPLLK* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1389 574 Coils Coil 61 81 - -
Lan7g1389 574 CDD PDI_a_family 200 301 - -
Lan7g1389 574 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Lan7g1389 574 PRINTS DnaJ domain signature 29 47 IPR001623 -
Lan7g1389 574 PRINTS DnaJ domain signature 47 62 IPR001623 -
Lan7g1389 574 PRINTS DnaJ domain signature 63 83 IPR001623 -
Lan7g1389 574 PRINTS DnaJ domain signature 83 102 IPR001623 -
Lan7g1389 574 SUPERFAMILY Chaperone J-domain 16 95 IPR036869 -
Lan7g1389 574 CDD DnaJ 27 80 IPR001623 -
Lan7g1389 574 Gene3D Glutaredoxin 197 307 - -
Lan7g1389 574 Gene3D DnaJ domain 25 169 IPR036869 -
Lan7g1389 574 SMART dnaj_3 26 83 IPR001623 -
Lan7g1389 574 Pfam DnaJ domain 27 88 IPR001623 -
Lan7g1389 574 SUPERFAMILY Thioredoxin-like 196 306 IPR036249 -
Lan7g1389 574 PANTHER DNAJ PROTEIN ERDJ3A 4 572 - -
Lan7g1389 574 ProSiteProfiles dnaJ domain profile. 27 91 IPR001623 -
Lan7g1389 574 PANTHER DNAJ PROTEIN ERDJ3A 4 572 - -
Lan7g1389 574 Pfam Thioredoxin-like domain 193 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1389 Lan-Chr7 19229746 19233705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1389 29 90 C2H2 Transcription Factor Family AT1G74250 41.176 9.39e-07 50.1