Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1386 ATGCATAAGTCTTTCAAAGATTCACTAAAAGCTCTTCAAGCTGATATTCACTTTGCAAATACTTTAGCTTCTGATTATGCGAGTGACCGCGACGGTGCGTGCCTTCAAATGAGACTGTCCTACGGTCCGGCTGCTCAGTTTTTCCTTTTTTTGGTTCAGTGGACTAATTGTCACCTTGCTGGATCCTTGGGGTTGCTTAGAATTCTTATATACAAGGCATATAAGGATGGAAAGACAACCATGTCTATTTATGAAAGAAAAGCGAGTCTAAAGGAGTTCTATGGTGTGGTCTTTCCCTCTTTACTGCAACTCCACAGAGGAATAACTGATGTGGATGACAGGAAACAAAAACATATATGCGCTACCAAGTACAAGGCGAAAGATGCAACGAGCAAAGGAAAGCTCTCCGAAATTGATGCAGAACGAGAAGAAGAATGTGGTATTTGCATGGAGATGAACACCAAGATTGTATTGCCAAATTGCAACCATTCAATGTGTATGAAATGCTACCGAGACTGGCATGCAAGATCTCAATCGTGCCCGTTTTGCCGCGATAGTCTTAAAAGGGTAAACTCCGGGGACCTTTGGATCTACATGAGCAACAATGACATAGATGACTTAACTTCAATCAACAATGAGAATTTGGAGAGATTATTTATGTACATAGAAAAGTTACCTCTCATTGTGCCAGATCCTATATTTATCTCATATGATCAACATTGGTGA 726 0.405 MHKSFKDSLKALQADIHFANTLASDYASDRDGACLQMRLSYGPAAQFFLFLVQWTNCHLAGSLGLLRILIYKAYKDGKTTMSIYERKASLKEFYGVVFPSLLQLHRGITDVDDRKQKHICATKYKAKDATSKGKLSEIDAEREEECGICMEMNTKIVLPNCNHSMCMKCYRDWHARSQSCPFCRDSLKRVNSGDLWIYMSNNDIDDLTSINNENLERLFMYIEKLPLIVPDPIFISYDQHW* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1386 241 SUPERFAMILY RING/U-box 134 189 - -
Lan7g1386 241 PANTHER RING FINGER PROTEIN 41, 151 1 229 - -
Lan7g1386 241 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 229 - -
Lan7g1386 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 193 IPR013083 -
Lan7g1386 241 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Lan7g1386 241 SMART ring_2 146 183 IPR001841 -
Lan7g1386 241 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Lan7g1386 241 Pfam Zinc finger, C3HC4 type (RING finger) 143 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1386 Lan-Chr7 19205525 19208824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1386 94 188 C3H Transcription Factor Family AT5G01960 31.683 1.19e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1386 K25840 - pop:7466068 413.305