Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1384 ATGGGTTCTAATCAACAACAATTACAAGAACCATGGATTTTGGAGAATGGTGGAAACAATATCAAAGGTTTGAGCAGAGAATTGAGGCATGGTAGAACAGCACATAACATGTCATCATCTTCATTGAGAAAGAAATCTAGTCTCACTCTTGTGCAAAAGATTCCATTTGGTTGGTTAAGAAATTTTTTTGCTAATTTTCAAGAGGTTATTCTTGGTACAAAGCTTTCCATTTTGTTCATTGCAGTTCCTCTAGCTATATTTGCTGAATTATATGGCCTTGGAAGGCCATGGATTTTTTTATTTAGCTTAATAGGGCTTACACCTCTTGCTGAACGTGTCAGTTTCCTCACAGAACAAATTGCTTATTACACTGGTCCCACAGTGGGAGGACTTCTGAATGCAACATGTGGGAATGTTACTGAGCTGATAATAGCAATATTTGCCCTTACTAGTGGCCAAGTTGCTGTGGTGAAGTATTCTCTCTTAGGTTCCATCATTTCAAACCTTCTACTTGTTCTTGGAACCTCTCTATTTTTTGGTGGTATTGCAAACATAAATGTGGAACAAAAATATGACAGAAGACAAGCAGATGTGAACTCACTTATGCTGCTATTAGCATTGTTGTGCCACTTGCTTCCATTGCTTTTCCGATATACCGGAGCGCCGATCGCAATCACCGATGCTTCATCGTTGAACTTGTCAAGAGCTGCTAGCATTATTATGTTGCTTGCATATTTTGCTTACCTTGTTTTTCAACTATTTACACACAGGCAGTTATTTGAGGCTGAAGAGGTTGAAGGTGGTGAAAATGACTCAGAAGAAGAAGCTGCAATTGGATTATGGAGTGGAGTTTCTTGGCTAATTGTCATGACTTTAATCATTGCTTTGTTGTCTGAATATGTGGTTGGCACAATTGAGGCTGCATCAAATTCATGGGGTTTATCTGTCAGCTTCCTCAGCATAATCTTGCTTCCAATAGTTGGAAATGCAGCTGAACATGCAGGAGCTATCATTTTTGCTTTTAAGAACAAGCTGGATATTTCATTGGGTGTAGCATTGGGCTCTTCAACTCAAATTGCATTGTTTGCAGTTCCTGTATGTGTGATTGTTGCATGGATAGCAGATATTCAAATGGACCTGAACTTCAAGATACTAGAGACAGGTTCTCTTGCTGTAGCAATAATAGCCACAACTTTCACTTTGCAGGATGGTACATCTAACTACCTAAAAGGGTTGATTCTTCTGCTATGTTACTTTGTTATTGCTGCATGCTTCTTTGTACAAACTGCACCAAGCCTTAACCATGCTGGTGGTACTAACATCAATCTTCAATCAGCAACTAGTGCAGTTTTAAGTGCTCAATAG 1365 0.3905 MGSNQQQLQEPWILENGGNNIKGLSRELRHGRTAHNMSSSSLRKKSSLTLVQKIPFGWLRNFFANFQEVILGTKLSILFIAVPLAIFAELYGLGRPWIFLFSLIGLTPLAERVSFLTEQIAYYTGPTVGGLLNATCGNVTELIIAIFALTSGQVAVVKYSLLGSIISNLLLVLGTSLFFGGIANINVEQKYDRRQADVNSLMLLLALLCHLLPLLFRYTGAPIAITDASSLNLSRAASIIMLLAYFAYLVFQLFTHRQLFEAEEVEGGENDSEEEAAIGLWSGVSWLIVMTLIIALLSEYVVGTIEAASNSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSSTQIALFAVPVCVIVAWIADIQMDLNFKILETGSLAVAIIATTFTLQDGTSNYLKGLILLLCYFVIAACFFVQTAPSLNHAGGTNINLQSATSAVLSAQ* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1384 454 Pfam Sodium/calcium exchanger protein 97 253 IPR004837 GO:0016021|GO:0055085
Lan7g1384 454 Pfam Sodium/calcium exchanger protein 284 424 IPR004837 GO:0016021|GO:0055085
Lan7g1384 454 Gene3D - 126 268 IPR044880 -
Lan7g1384 454 Gene3D - 271 427 IPR044880 -
Lan7g1384 454 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 9 435 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lan7g1384 454 TIGRFAM cax: calcium/proton exchanger 78 426 IPR004798 GO:0006816|GO:0015369
Lan7g1384 454 TIGRFAM caca2: calcium/proton exchanger 61 426 - -
Lan7g1384 454 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 9 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1384 Lan-Chr7 19180867 19185314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1384 10 431 Antiporters AT2G38170 69.070 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1384 K07300 - gmx:100779440 624.009