Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1373 ATGATTGGCAATTTCTTTTGTGCCTTGAATTGTTGTAAAGGGAAGGGTGTTCTTGATCATCAGCCACATGAAAAAGTGATTGCAACTAAAACATATAGCTATAAGTCATTGAGATCGGCAACTGGAGATTTTCATCCTTCAAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGGGATGGTACTCAAGTTGCGATCAAGTCTCTTTCGGTTGATTCTAAACAAGGACGTCATGAATTCATGACAGAAATTGATATGATATCAAGGACAAGGCATCCAAATCTTGTGGAACTAATTGGCTTCTGCGTTGAGGGTAGTCATCAAATATTGGTGTACGAATTTTTGGAGAACAATAGCCTCGCGAGTTCCTTGCTTGGTTCCAGAAGTAAATATGTTCCTCTCGATTGGCCAAAGAGGGCTGCTATTTGCCTTGGTACGGCTTCTGGTCTTAGGTTTCTTCATGAAGAAGCGCAACCAAGAATCGTTCACAGAGATATCAAGGCCAGCAACATACTGCTGGATGGGAACTTTAATCCTAAAATTGGAGATTTTGGTCTCGCAAAACTGTTTCCCGACAATATCACCCATGTTAGTACTCGAGTTGCAGGAACGGAGGGATATCTTGCACCAGAATATGCACTTCTAGGACAGCTTACAAAGAAGGCTGATGTATATAGTTTTGGGGTTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGTAGCAAAGCAGCATTTGGAGAGAATCTTTTGGTTCTAGTGGAATGGGCATGGAAGCTGAAAGAAGAGAAAAGGCTTCTAGACCTTGTTGATCCAAATCTAACCAACTACAATGAGATTGAGGTGTATAGGTTCATTATGGTTGCTCTATTTTGCACCCAAGCAACTTCTCAACATAGACCAAACATGAAGCAAGTATTGAAAATGCTTTCCAAGGAAGTTCATATCAATGAGAAGGCATTGACTGAGCCTGGAATATATAGATGCCATTCCTACGGAAAGATCGTCACTTCTTTGAATGACTCATCTTCATCTTCTCAAGTAATAAGGAGACTAAACCAAATGGAGATTCTTCGACTTTTCAGAAGAAGATGGCGGCCAAGAAAAACTATAGGTGAAACGATTAAGAAAGATTTAGAGATCAATGCTTTGTTAATGAACATGATTTATGATAAAACATTGTAG 1197 0.3968 MIGNFFCALNCCKGKGVLDHQPHEKVIATKTYSYKSLRSATGDFHPSSKIGGGGYGVVHKGVLRDGTQVAIKSLSVDSKQGRHEFMTEIDMISRTRHPNLVELIGFCVEGSHQILVYEFLENNSLASSLLGSRSKYVPLDWPKRAAICLGTASGLRFLHEEAQPRIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNITHVSTRVAGTEGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGENLLVLVEWAWKLKEEKRLLDLVDPNLTNYNEIEVYRFIMVALFCTQATSQHRPNMKQVLKMLSKEVHINEKALTEPGIYRCHSYGKIVTSLNDSSSSSQVIRRLNQMEILRLFRRRWRPRKTIGETIKKDLEINALLMNMIYDKTL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1373 398 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 358 - -
Lan7g1373 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lan7g1373 398 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Lan7g1373 398 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1373 398 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 25 358 - -
Lan7g1373 398 SMART serkin_6 44 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1373 398 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Lan7g1373 398 SUPERFAMILY Protein kinase-like (PK-like) 26 314 IPR011009 -
Lan7g1373 398 Pfam Protein tyrosine and serine/threonine kinase 47 314 IPR001245 GO:0004672|GO:0006468
Lan7g1373 398 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Lan7g1373 398 CDD STKc_IRAK 50 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1373 Lan-Chr7 19057425 19061466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1373 31 350 Receptor kinase-like Gene Family AT1G56120 50.779 4.04e-102 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan7g1373 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1373 - - lang:109352637 778.859