Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1366 ATGAATAGTGGGATTGAAGTTCTATCTCAAGCTTCTTATATCCAAACTTCAAATTGGTTATTCCAAGAAAGCAATGGATCAAAATGGACTCCACAAGAGAACAAATTGTTTGAAAATGCTCTGGCTTTGTATGATAAGGACACACCTGATAGATGGCTAAGTGTAGCAGCTATGATTCCAGGCAAAACTGTTGCTGATGTGATCAAACAATACAAGGAACTAGAAGAAGATGTTAGTGTCATTGAAGCAGGTTTATTCCCTGTTCATGGTTATAGTACTAGTTCTTTCACACTAGAGGAGGTTGAGTTAAACAATCACGGCTTCGATCGGTTCGAGCAATTGTATAGGGTTGGTGGAAAAAGGGGTGCTTCAACTAGGCCATTTGAGCAGGAAAGAAAGAAGGGTGTGCCATGGACTGAAGAGGAGCATAGGTTATTTCTGTTGGGTCTTAAGAAGTATGGCAAAGGGGATTGGAGAAACATTTCTAGGAAGTTTGTGACTACAAGAACACCAACTCAAGTTGCAAGTCATGCTCAAAAATATTTCATTAGGCAACTTACAGGAGCTAAGGATAAGAGGAGATCGAGTATCCATGATATCACAATGGTTAATATCTCAGAAACGGAACCTCCTTCATCAAATGGTGACTTACCTTCTTATACAGATCAATCGGTCAAGGTTTCGAATCGACACCAGAATCATAAATTGTCTAGTATGATCAAACATGAATATAATTGGAACTTAACATATGAGGGCATGCCAATGGTTTTAAGTACAACAAATGGAAACAAGTTTGATGCATCAATGATTGGAATTTCTTCATATGGATGCCAATTTGCACCTTATGAAAATATATGTTGA 861 0.381 MNSGIEVLSQASYIQTSNWLFQESNGSKWTPQENKLFENALALYDKDTPDRWLSVAAMIPGKTVADVIKQYKELEEDVSVIEAGLFPVHGYSTSSFTLEEVELNNHGFDRFEQLYRVGGKRGASTRPFEQERKKGVPWTEEEHRLFLLGLKKYGKGDWRNISRKFVTTRTPTQVASHAQKYFIRQLTGAKDKRRSSIHDITMVNISETEPPSSNGDLPSYTDQSVKVSNRHQNHKLSSMIKHEYNWNLTYEGMPMVLSTTNGNKFDASMIGISSYGCQFAPYENIC* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1366 286 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Lan7g1366 286 CDD SANT 137 182 IPR001005 -
Lan7g1366 286 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 186 IPR017930 -
Lan7g1366 286 ProSiteProfiles SANT domain profile. 138 186 IPR017884 -
Lan7g1366 286 CDD SANT 28 74 IPR001005 -
Lan7g1366 286 Gene3D - 21 88 - -
Lan7g1366 286 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
Lan7g1366 286 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 6 277 - -
Lan7g1366 286 ProSiteProfiles Myb-like domain profile. 130 182 IPR001005 -
Lan7g1366 286 SUPERFAMILY Homeodomain-like 131 185 IPR009057 -
Lan7g1366 286 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 6 277 IPR043363 -
Lan7g1366 286 SMART sant 134 184 IPR001005 -
Lan7g1366 286 SMART sant 25 77 IPR001005 -
Lan7g1366 286 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 185 IPR006447 GO:0003677
Lan7g1366 286 Pfam Myb-like DNA-binding domain 27 72 IPR001005 -
Lan7g1366 286 Pfam Myb-like DNA-binding domain 137 182 IPR001005 -
Lan7g1366 286 Gene3D - 136 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1366 Lan-Chr7 18866735 18869039 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g1366 Myb_DNA-binding 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1366 - - gmx:100775697 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1366 7 18866735 18869039 Lan13g1123 13 16745380 16747975 LSH