Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1360 ATGCTTCAGATTCGGCTTAGTAAGGCACGTGCCACGGAAGGGTCAGCAGGGGCGAAGCTGTCACTTGCGGAGACTGTCATGGTTGCCTGCCCAGACCATCTAGTCCTTGCTGATCTCCCTGTTGCAAAGGGCATTGGAGGGGCTACTGCTGTTTCCCTTGTTAGGACATTGGGACGTAGATCCCGCCGCCAGCTTGGTGAGCGAGTCCATTTCTGTGTTCGTTGTGATTTCCCAATCTCTATCTATGGACGACTGAGCCCTTGTGATCATGCCTTCTGTCTTGATTGTGCTAGAAGTGATTCATTGTGCTACCTGTGTGACGAACGAATCCAGAAGATTCAGACAATCAAAATGATGGAAGGAATCCTCATATGCGCGGCTCCTCACTGTCTGAAATCTTTCCTGAAGAAGGCTGATTTTGAATCTCATATCCAAGACAGACATGTTAGCCTTCTTCGACCCAATGCAGACAAAGAAGATGGAAACGAGTCAGAGGCGCAGAGTGTCAGGCAATCTACAGCTTCAGACTCCACTGCTCGAGGTCCCCAAAGACCAGTTTTTTCTCCCGGTTTGAATCCCCAGCTCTATGATCAAGAAGAAAAAACTCTTCGACAACCACCAAGAGATCAACCACCTTCAAGGCCAAATTTGCAGTCAAAGCCACCATATTTTGGTCAACAACATCACCCTTCAGATACCCCTTCTGGCTCCTTTGGAGGTATTCAACAGGGCTTGCATCAGCAAAGTTTCGATATGCACCATCCGTCGCAAGAAACTTCACAGTTTTCGGACAGGCAGCAATCAGTTGGTCCAGAGACCCAAATTTCAGAGCATCCACCAATGCACTCAGGCCAGCCTCCCAACATCCCCGCACAGGTTACTTCGAACCCAATGCTGAACCCTCCTATGCCGTTCGGATACCCTCCTTACCCACAGGAAAGAGGTCAACCATTTTATGCTGCCACCTACGATAATATTCCTAGGCAGGACTCAACTTCTGATATAGGTGGGGACAAGAGTTCATTACTCGGTTTACCACAAGGCGGTGTCCCAAGTGGCCCAAATTTTCCAGGAAATTATCCCCAACCCTGGCATGCTGGAATGGCTGGTGCACCTTTCGAACAAGGGCAGGGTGGTATGGTAGTGGATCCGAGAGATGCCAAAGGTGTATTGGCACCACAGCATGTGGCTCTCCCACCACCCCCACCACCGTCCCACATGTCAAATATGAAACGGAGTTACTATTCCGGTGAGGGTGGACATGATGATGGTCAGAGTTATGGGTGGCAGCAGCATGATAACCTTGATAGCTTTGGTGGCCAAGGCTAG 1329 0.4981 MLQIRLSKARATEGSAGAKLSLAETVMVACPDHLVLADLPVAKGIGGATAVSLVRTLGRRSRRQLGERVHFCVRCDFPISIYGRLSPCDHAFCLDCARSDSLCYLCDERIQKIQTIKMMEGILICAAPHCLKSFLKKADFESHIQDRHVSLLRPNADKEDGNESEAQSVRQSTASDSTARGPQRPVFSPGLNPQLYDQEEKTLRQPPRDQPPSRPNLQSKPPYFGQQHHPSDTPSGSFGGIQQGLHQQSFDMHHPSQETSQFSDRQQSVGPETQISEHPPMHSGQPPNIPAQVTSNPMLNPPMPFGYPPYPQERGQPFYAATYDNIPRQDSTSDIGGDKSSLLGLPQGGVPSGPNFPGNYPQPWHAGMAGAPFEQGQGGMVVDPRDAKGVLAPQHVALPPPPPPSHMSNMKRSYYSGEGGHDDGQSYGWQQHDNLDSFGGQG* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1360 442 MobiDBLite consensus disorder prediction 152 308 - -
Lan7g1360 442 MobiDBLite consensus disorder prediction 219 299 - -
Lan7g1360 442 MobiDBLite consensus disorder prediction 166 182 - -
Lan7g1360 442 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 120 IPR013083 -
Lan7g1360 442 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 414 IPR040383 GO:0016567|GO:0061630
Lan7g1360 442 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Lan7g1360 442 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 414 - -
Lan7g1360 442 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Lan7g1360 442 MobiDBLite consensus disorder prediction 427 442 - -
Lan7g1360 442 CDD RING-HC_HAKAI_like 70 106 IPR040380 -
Lan7g1360 442 MobiDBLite consensus disorder prediction 393 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1360 Lan-Chr7 18811968 18823795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1360 1 439 C2H2 Transcription Factor Family AT5G01160 45.011 1.64e-105 315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1360 7 18811968 18823795 Lan11g1716 11 33485095 33487777 LSH
Lan7g1360 7 18811968 18823795 Lan13g1118 13 16687313 16691279 LSH