Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1351 ATGTCACATGTTGATTTAGAGCAAGGACATAATCGTCATTCTGTTGTTGGAAGTGAGGTGAGTGCTGAAGGGGAAAGTCAATATTTATCTGATGCAGAAGATGGTTCATGCTACTCTCATTTCTATTCAATAAATGGTGGTGAGTTTGAAGATCATAACTTTGATGGTGTTTCTGATAATGAGGTTGAAGTTCAGGTTGATGGTGTTGTTGCTGATACTGGGAGAGTTTCTTCTGTTACTGATTGTTCTGTTGAGAGGGATTGTAGAATTTGTCACATGGGTTTGGAGAGTGATAGTCATGAATGTGGAGTTCCCATTGAATTGGGTTGTTGTTGTAAGGATGATTTAGCTGCAGCTCACAAACACTGTGCTGAAACCTGGTTCAAGATTAAGGGTAATAGGACCTGCGAAATTTGCCATTGCGTTGCACAAAATGTTTTCGGACCAAACGAGGAATCAACAGAGCATTCGAGTAACTACACCATTACAGCAGCCATACTCTCAGCACATGTTCCTCCACCAGAACCTCCGAGATTTTGGCACGGCCATCGCTTCCTGAATTTTCTGCTTGCTTGCATAGTTTTTATATTCATCATATCGTGGCTTTTTCGCATTAAAGTGCCAGCATCATAA 633 0.4107 MSHVDLEQGHNRHSVVGSEVSAEGESQYLSDAEDGSCYSHFYSINGGEFEDHNFDGVSDNEVEVQVDGVVADTGRVSSVTDCSVERDCRICHMGLESDSHECGVPIELGCCCKDDLAAAHKHCAETWFKIKGNRTCEICHCVAQNVFGPNEESTEHSSNYTITAAILSAHVPPPEPPRFWHGHRFLNFLLACIVFIFIISWLFRIKVPAS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1351 210 SMART ringv_2 87 140 IPR011016 GO:0008270
Lan7g1351 210 ProSiteProfiles Zinc finger RING-CH-type profile. 80 146 IPR011016 GO:0008270
Lan7g1351 210 MobiDBLite consensus disorder prediction 1 25 - -
Lan7g1351 210 CDD RING_CH-C4HC3_MARCH 88 140 - -
Lan7g1351 210 SUPERFAMILY RING/U-box 85 143 - -
Lan7g1351 210 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 148 IPR013083 -
Lan7g1351 210 PANTHER ZINC FINGER, RING-CH-TYPE 2 208 - -
Lan7g1351 210 PANTHER OS01G0850200 PROTEIN 2 208 - -
Lan7g1351 210 Pfam RING-variant domain 88 139 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1351 Lan-Chr7 18688954 18692256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1351 47 210 C3H Transcription Factor Family AT5G05830 48.108 7.33e-51 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1351 - - gmx:100808666 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1351 7 18688954 18692256 Lan11g1721 11 33587704 33591189 LSH