Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1338 ATGGCTGCTGAGGGCTTTGAACCCTACCATGTTCCTCAACAAAGCAGAAGAGAAAAGCTTAGAGTTCTACCTCATAACCAACCTACTCTTCTTTCTGAATCCACTTCTTTATTCCCTCTCTTTGATCCTTCACTTGTTCCATCTGATTTGTTAACTTCTCCTAACCAACAAGGTCACATGATGTTCCACAACAATAATATTCTTCTTTCTAAAGAAAACCAAGGTTGTAATAATGGTGTTATGGGATTTTCAAGGGTTGTGAATGCTTCTTCTTGTTCTTCTTCATACTTGGATCCTTCAATTCAAGTTATTAACAACAACCCTTTTCTTTATAACCAACCTCAAAGCTTTCAAAACCTTAGTAGTAGTGAAATGATGATGTTTAAGTCTGAACCATTATCTTTGTCTCTCTCATCTCACATCAACAACAATAATAATACTCAATACCCATATGGTTGTGGCTCAAATGAAGTTTTTTCTAGGAACACAGTTCCACTTGGACCTTTTACTGGTTATGCTATGATATTGAAGGGATCTAGGTTCTTGAAGCCTGCACAACAATTATTGGAAGAGGTATGTGGTTTTGGGGTTCATGGAATTTACACTGAGAAAATTGCTGCTGATGCAACTTTGATGGAACCTCCTTCTATGGAGAGTTTAAGTGCTGGTGGAATAGTTGGTGTGGATGATGATGCAATTGGGGATGGAAATGAAAGTAGGAAGCAGAAGCCAAAACTCTTAACCATGCTAGATGAGGTTTACAGGCGGTACAAGCAGTATTATCAACAGATGCAAGCAGTCGTAACTTCATTTGAGTATGTTGCCGGCCTCGGTAACGCAGCACCATATGCAAGTTTGGCTATAAATGCCATGTCCAAACATTTCAGATGCTTGAAGAATGCAATAACTGATCAGATTCAGTTTATCAATAAGACTCAGTTTCAGGTAAGCAATAACAGAAAAGATGAATCTCCGAGATTCCGTAACACCAATGATAGAGGAGGCCCTTACAGCCATAGACCACATGGGTTTCTTGAGCACCAACAGCAACCTGTTTGGCGACCTCAAAGAGGACTCCCAGAGCGTGCTGTCAGTGTTCTCAGGGCGTGGTTGTATGATCACTTTCTTCACCCGTACCCTACTGACACCGACAAGTTAATGTTGGCGAAACAAACTGGTCTATCTCGTAGTCAGGTGTCTAATTGGTTTATTAATGCTAGAGTAAGGCTTTGGAAACCCATGGTGGAAGAAATACATATGCTAGAATCACAACAAGCTCAGAAAAGTTCCCAGAGGGAAGAAGGTAGTACGAACAAGTCGATTCATAATCATGTAGCTTCGGATCGTAGCTCTCTTGTTAGTCATGAGAATCCATCTACCTCAACTTGGAATGAATTTCCGAACACTAGCATTAATCATCAAGTGGGTATAGGAGGAAGCATGGGGAGTGTTGGTAATGGTATATCACTAACACTTGGTCTTCATCAAAATCATGGGATAGGGTTATCTGAACCATTTCCTATGAATGCAGCTCAACGTTTCGGCATGACCCTTGATCCTGAAGGTTGTGTTCTAAGCAGTTTTGAATCACAAAATAGGCTTTTTGGAAGAGATGTTATCGGAGGCCAACTTTTGCATGATTTGTAG 1647 0.405 MAAEGFEPYHVPQQSRREKLRVLPHNQPTLLSESTSLFPLFDPSLVPSDLLTSPNQQGHMMFHNNNILLSKENQGCNNGVMGFSRVVNASSCSSSYLDPSIQVINNNPFLYNQPQSFQNLSSSEMMMFKSEPLSLSLSSHINNNNNTQYPYGCGSNEVFSRNTVPLGPFTGYAMILKGSRFLKPAQQLLEEVCGFGVHGIYTEKIAADATLMEPPSMESLSAGGIVGVDDDAIGDGNESRKQKPKLLTMLDEVYRRYKQYYQQMQAVVTSFEYVAGLGNAAPYASLAINAMSKHFRCLKNAITDQIQFINKTQFQVSNNRKDESPRFRNTNDRGGPYSHRPHGFLEHQQQPVWRPQRGLPERAVSVLRAWLYDHFLHPYPTDTDKLMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLESQQAQKSSQREEGSTNKSIHNHVASDRSSLVSHENPSTSTWNEFPNTSINHQVGIGGSMGSVGNGISLTLGLHQNHGIGLSEPFPMNAAQRFGMTLDPEGCVLSSFESQNRLFGRDVIGGQLLHDL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1338 548 Pfam Associated with HOX 175 303 IPR006563 -
Lan7g1338 548 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 24 523 - -
Lan7g1338 548 SMART HOX_1 353 417 IPR001356 GO:0003677
Lan7g1338 548 CDD homeodomain 353 414 IPR001356 GO:0003677
Lan7g1338 548 Pfam Homeobox KN domain 370 409 IPR008422 GO:0003677|GO:0006355
Lan7g1338 548 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 24 523 - -
Lan7g1338 548 MobiDBLite consensus disorder prediction 422 467 - -
Lan7g1338 548 SMART prehox3 170 304 IPR006563 -
Lan7g1338 548 ProSiteProfiles 'Homeobox' domain profile. 350 413 IPR001356 GO:0003677
Lan7g1338 548 Gene3D - 356 418 - -
Lan7g1338 548 SUPERFAMILY Homeodomain-like 355 420 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1338 Lan-Chr7 18486904 18491261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1338 120 548 Homeobox Transcription Factor Family AT5G02030 49.795 2.32e-121 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lan7g1338 POX 3.7e-39 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1338 7 18486904 18491261 Lan11g1735 11 33797185 33803803 LSH