Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1321 ATGATGTTGAATGAAACTAGTGTTTGTGATGATGATGATATGTTGTATGAACAACTATGGAAAACATGTGCAGGACCTCATGTTGATGTTCCTCATGTTGGTCAAAGGGTCTTTTATTTTCCTCAAGGACACATGGAACAATTAGAAGCATCAACAAATCAGGAACTAAATCAGAGGATTCCATTGTTCAAACTTCAGACCAAGATCCTTTGCCGGGTCATTAATGTCCGTTTACTGGCTGAACCAGAAACAGATGAGGTTTATGCACAAATTACTTTGGTGCCAGAATCTAATCAAGCTGAGCCTACAAGCCCTGATCCATGCCCTGCTGAGCATCCAAGACCAACAGTTCACTCCTTTTCCAAGGTCTTAACTGCCTCTGATACAAGCACCCATGGTGGCTTCTCTGTCCTCAGGAAACACGCCACCGAATGCCTTCCGGCTTTGGACATGTCCCAATCAACCCCTACTCAGGAATTGGTTGCTAGGGATCTTCATGGTTACGAATGGCGCTTTAAGCATATATTTAGAGGTCAGCCTCGCCGACACTTGCTCACAACCGGATGGAGTACTTTCGTGACTTCCAAGAGATTAGTTGCGGGAGATACCTTTGTATTTCTCAGAGCCGACAACGGAGAATTGCGTGTTGGAGTGAGGCGCCTTGCTCCTCAGCAGAACAGCATGCCATCATCAGTGATTTCCAGTCAGAGCATGCACTTAGGCGTTCTTGCAACTGCGTCTCATGCTGTTGCAACTCAGACTCTTTTCTTAGTATACTATAAGCCAAGGACGAGCCAGTTCATCATAAGCGTAAACAAGTATTTGGAGGCTGTCAATCATAAATTTGATGTTGGTCTGAGGTTCAAGATGAGGTTTGAAGGAGATGATTCTCCCGAGTCCGACAAAAGATTTTCGGGCACAATAGTTGGAGTAGAAGATATTTCTCCTCATTGGATAAATTCAAAATGGCGATCCCTTAAGGTTCAATGGGATGAACCTGCATCTGTTCCAAGACCAGATAGGATTTCACCTTGGGAGATTGATCCTCTTCTGGCTTCTGTTCCTACGCCTTCGCTTCAACCAGCTGTCGTAAAAAATAAGAGGCCTCGACCACCCAGTGAAATTCCGGATTTCGACACAACAACAGCTGCCTCAGCTTTCTGGGATGCTGGGATGACACCGTCCGATTTAACACAACTTAATGTTACGGCCGAAAGCAAAAGGAGTGACAGTAATCATATGTGGCATCATAAGCAGATTGATAATTGTAAAAACAGCTGCAATGCTATATCAAGGAATCATGCACAAGGAAGTTGGCTATCTTCTCCTCATTCCAGTGTTCCTTCTCATTTATTTCAGGACCCGACCGATGATAGCAAGAGTGTATCAGCTTGGCCTAATTCAAAAACTCATTCAGAAAAACTGAACAATGAAAATTTGCTTGACCAAGTTGATAAGGAGAACAAAGTAGAGGTTGCTACAAGCTGTAGATTGTTTGGAATTGATCTTATTGATCATACTAGGAACTCTCCTGCTATAGAGAAAGCATGTGTACATTCTGAAAATATATCCGAAATCACGAATGAGGGCTGCATTAGAACCTTGTCCAAAACTGATGCAGACCATAATTACGATCTCTCAAAGGCATCTAAAGAGAGGAAACAGGAACAGATGCAAGCATCTCCTAAAGAGACTCAAAGCAAGCAAATCTGTAGCAGAAGTTGCACTAAGGTTCAAATGCAGGGGATCGCAGTAGGTCGTGCCGTGGACTTGACCATGTTGGATGGTTACGATCAACTTATAGATGAATTGGAGAAGATGTTTGACATAAAGGGTCAGCTTCAACTAAGGAATAAGTGGGAAATTGTGTTCACTGATGATGAAGGTGATATGATGCTCGTTGGCGATGATCCGTGGCCTGAATTCTGTAATATGGTGAGAAGAATCTTCATATGTTGCAGCCAAGATGTGAAGAAAATGAGTTCAGGGAACAAATTGCCTCTAACTTCTTCAATAGAAGATGAAATTGTATTAAGCTCAGACACAGCTGAGAATTGA 2058 0.4286 MMLNETSVCDDDDMLYEQLWKTCAGPHVDVPHVGQRVFYFPQGHMEQLEASTNQELNQRIPLFKLQTKILCRVINVRLLAEPETDEVYAQITLVPESNQAEPTSPDPCPAEHPRPTVHSFSKVLTASDTSTHGGFSVLRKHATECLPALDMSQSTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRADNGELRVGVRRLAPQQNSMPSSVISSQSMHLGVLATASHAVATQTLFLVYYKPRTSQFIISVNKYLEAVNHKFDVGLRFKMRFEGDDSPESDKRFSGTIVGVEDISPHWINSKWRSLKVQWDEPASVPRPDRISPWEIDPLLASVPTPSLQPAVVKNKRPRPPSEIPDFDTTTAASAFWDAGMTPSDLTQLNVTAESKRSDSNHMWHHKQIDNCKNSCNAISRNHAQGSWLSSPHSSVPSHLFQDPTDDSKSVSAWPNSKTHSEKLNNENLLDQVDKENKVEVATSCRLFGIDLIDHTRNSPAIEKACVHSENISEITNEGCIRTLSKTDADHNYDLSKASKERKQEQMQASPKETQSKQICSRSCTKVQMQGIAVGRAVDLTMLDGYDQLIDELEKMFDIKGQLQLRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICCSQDVKKMSSGNKLPLTSSIEDEIVLSSDTAEN* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1321 685 Gene3D - 569 661 - -
Lan7g1321 685 ProSiteProfiles PB1 domain profile. 573 665 IPR000270 GO:0005515
Lan7g1321 685 ProSiteProfiles B3 DNA-binding domain profile. 120 222 IPR003340 GO:0003677
Lan7g1321 685 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 673 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lan7g1321 685 Pfam Auxin response factor 246 327 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lan7g1321 685 Pfam B3 DNA binding domain 120 220 IPR003340 GO:0003677
Lan7g1321 685 SUPERFAMILY CAD & PB1 domains 576 649 - -
Lan7g1321 685 CDD B3_DNA 118 220 IPR003340 GO:0003677
Lan7g1321 685 Gene3D - 281 354 - -
Lan7g1321 685 Gene3D - 117 221 IPR015300 -
Lan7g1321 685 PANTHER AUXIN RESPONSE FACTOR 9 673 - -
Lan7g1321 685 SUPERFAMILY DNA-binding pseudobarrel domain 111 249 IPR015300 -
Lan7g1321 685 MobiDBLite consensus disorder prediction 436 474 - -
Lan7g1321 685 Pfam AUX/IAA family 552 657 IPR033389 -
Lan7g1321 685 SMART B3_2 120 222 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1321 Lan-Chr7 18332375 18337605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1321 13 666 B3 DNA Binding Superfamily AT4G23980 58.663 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lan7g1321 B3 3.4e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1321 K14486 - gmx:100779003 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1321 7 18332375 18337605 Lan13g1101 13 16440858 16456418 LSH