Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1311 ATGGGTGCTTGTTGGAGCAATAGAATTAAGTCTGTGAGTTCTTCCAATACAGGCTTCACTTCTAGAAGTGTTAGCAGGAATGGCTATGATACGAGCTCAAACAGCAGGAACTCATCAGCTTCCGTACCCGCCACTCCTCGAAGCGAGGGTGAGATCTTACAGTCTTCCAATCTGAAAAGCTTCAGCTTCAGTAATGTAAGAGCTGCCACGAGAAATTTCCGCCCTGACAGTGTCCTGGGGGAGGGTGGTTTTGGTTCGGTTTTTAAGGGCTGGATTGATGAGCAATCACTTGCTGCTACCAAACCAGGAATAGGCATGATTGTCGCTGTTAAGAGACTTAACCAAGATGGTTTCCAGGGTCATAAAGAATGGCTGGCTGAAATCAACTATCTCGGGCAACTGCAGCATCCTAATCTGGTCAAGTTGATAGGATTTTGCTTTGAGGATGAGCATCGGCTTCTGGTTTATGAATTTATGCCTAAGGGTAGCGTGGAGAATCATCTATTCAGAAGGGGTTCATTTTTTCAGCCACTATCTTGGAGTTTGCGATTGCAAATAGCCCTAGGGGCTGCAAGGGGTCTTGCTTTTCTCCATAGTACAGAACCTAAAGTCATATATCGTGACTTTAAGACTTCAAATATCCTGCTCGATACTAAATACAATGCCAAGCTTTCGGATTTCGGGTTGGCCAGAGATGGGCCAACTGGTGATAAAAGTTATGTCTCTACTAGGGTCATGGGAACCCATGGGTATGCGGCACCGGAGTATCTAGCAACAGGTCATCTCACTGCCAAGAGTGATGTGTATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCAGGAAGACGAGCGATAGACAAGAACCAGCCATCCGGAGAACATAACTTAGTTGAATGGGCCAAACCGTATCTATCTAACAAACGTAGAGTTTTTCGTATAATGGATCCTCGTCTTGAAGGTCAGTATTCCCATAATCGAGCCCAACTGGCAGCCACCCTTTCTATGCAATGTCTTGCTGTGGAGCCTAAGTGCAGGCCGAATATGGACGAGGTGGTAAAGGCATTAGAGCAGCTTCAAGATTCAAAGGACACCCAGAAAAAACGTGCTGACCAGAAACAGCGCCGTGTGCCTAATTCCGGCTTCGGCCCTTCCAATGGCAACCCGACATCTGGCAAAGGTAGTGCTGATGCTCTCAGAAAGGCTTCAGCTTATCCCAGGCCTTCGACTTCTCTCCTTCGCGGTTGA 1245 0.4667 MGACWSNRIKSVSSSNTGFTSRSVSRNGYDTSSNSRNSSASVPATPRSEGEILQSSNLKSFSFSNVRAATRNFRPDSVLGEGGFGSVFKGWIDEQSLAATKPGIGMIVAVKRLNQDGFQGHKEWLAEINYLGQLQHPNLVKLIGFCFEDEHRLLVYEFMPKGSVENHLFRRGSFFQPLSWSLRLQIALGAARGLAFLHSTEPKVIYRDFKTSNILLDTKYNAKLSDFGLARDGPTGDKSYVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVEWAKPYLSNKRRVFRIMDPRLEGQYSHNRAQLAATLSMQCLAVEPKCRPNMDEVVKALEQLQDSKDTQKKRADQKQRRVPNSGFGPSNGNPTSGKGSADALRKASAYPRPSTSLLRG* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1311 414 SUPERFAMILY Protein kinase-like (PK-like) 42 355 IPR011009 -
Lan7g1311 414 PANTHER KINASE 1B 22 395 - -
Lan7g1311 414 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Lan7g1311 414 MobiDBLite consensus disorder prediction 7 51 - -
Lan7g1311 414 MobiDBLite consensus disorder prediction 377 392 - -
Lan7g1311 414 PANTHER OS01G0588500 PROTEIN-RELATED 22 395 - -
Lan7g1311 414 MobiDBLite consensus disorder prediction 358 414 - -
Lan7g1311 414 MobiDBLite consensus disorder prediction 358 374 - -
Lan7g1311 414 MobiDBLite consensus disorder prediction 1 51 - -
Lan7g1311 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lan7g1311 414 Gene3D Transferase(Phosphotransferase) domain 1 159 381 - -
Lan7g1311 414 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1311 414 CDD STKc_IRAK 79 358 - -
Lan7g1311 414 Coils Coil 348 375 - -
Lan7g1311 414 Pfam Protein kinase domain 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1311 414 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1311 Lan-Chr7 18196747 18200129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1311 20 355 Glycoside Hydrolase AT3G07070 46.974 1.13e-105 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan7g1311 Pkinase 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1311 - - gmx:100819620 710.294