Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1309 ATGGCTGAGGTGAAATCGGAGGAGTGTTGTCAGGAGAATAAGCAATCTGCTGCTGCTTCTTGCTCTTCTGTATCCGAAGGCGGCGGCAGTATAATTCACAAGTCTCCAGCTATATGTAGTTCAACACTGATGTCGCCCTCTCATCGAAGGACCACTGGCCCTATAAGGCGTGCAAAGGGAGGTTGGACAGCACAAGAGGATGAGACGTTAAGGAATGCTGTTGCAACTTTTAAGGGAAAGAGTTGGAAGAAAATAGCTGAGTTTTTTCCTGATAGATCAGAAGTTCAGTGTCTCCACAGATGGCAAAAAGTACTGAATCCGGAACTTGTTAAAGGACCTTGGACACAAGAGGAGGATGATAAAATTGTTGAATTGGTGTCAGAACACGGGCCTACAAAATGGTCTTTGATAGCCAAGTCTTTGCCTGGTCGAATAGGGAAACAGTGCCGAGAACGGTGGCACAATCATCTTAATCCCGACATAAAGAAGGATGCTTGGACTGTGGAAGAGGAATTGGCCTTGATGAATGCTCATAGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCCGGGAAGGACTGACAATGCAATAAAGAACCATTGGAATAGTTCTTTAAAGAAAAAGTTGGATTTTTATATAGCTACAGGAAGACTTCCACCAATTTCAAAGAACAATACACAAGTTGTTGTCAGAGATTCAATTAGACCATCTGCTACTAAAACACTACTTGTTTCTTCGAATAAAGAGTTAAATGGAGCTGTTGAAACATCTTCTGAAACTACTGCCATTAGTAAACTAGATGACAGTGGCAAGAATCGGTTAGAGTCCTCGGAAATAGTAAGAGAAGTTGGCGATTCTTCAAGTGTTCCTGCAAATGAATCTGCTGATTCTGATTGTGTAGAATGCAATCCTGGATCGTCCAACATTGATCTCAACTGTGGCTGCTCAGAACCACTGTCCGGAGCTAATCATGGAGTAACTTGTGGGCCAAAATTTGAGAATTCCGGCCTCAACAGAAACTTAACTATTACGCATTTTGCAAACAATGGTGAAATGAGCAGTAGCAGGTTAATCAGAACATCTCTTCCACAAGAAAGTCCATCATGTGGTTCTTTGTGTTATGAGCCACCTTACTTAGAAGGTTCAGTTCCTTTAGATTCTCTTTCTCTAAATAACTTATGTCTGCATAATGAGTCAATGTTGTCTCCTATTAGTTTATTTACTCCACCAAGTGTGAAGGGTAGTGAATTATGCAGAGAATCACCCGAATCAATATTGAAAAAGGCTGCTAATACTTTTCCGAATACTCCTTCCATATTGAGGAGGAGAAGGACTGGAGTCCTATCAGAAACATCTCCTACTAAAGTTTTGAAACTTGATAATGGTTTGCAAGCTTCTAATGAACCGGCGAGATATTATGGTAAGTCTGGTTCTGAAGTTGGGAGGTTTGCCGAGAGTCCAGTTGGCCATGGCAATGAAAGTGACATTCCTAACAGTAAGGCGTTCAATGCATCTCCACCATACCGGTTGAGATCCAAGCGAACAGCGGTTATCAAGTGTGTAGAAAAACAACTCGAGTTTGCCTTTGACAAAGAGAAGAATGATTGCAGTATCAATGCAATGGAAAAATCTGGAAAGAGGAACAATGTTATGTCTGAAGATTGTCTGCATGACACAAAATTGGTAGTGACATAG 1704 0.4143 MAEVKSEECCQENKQSAAASCSSVSEGGGSIIHKSPAICSSTLMSPSHRRTTGPIRRAKGGWTAQEDETLRNAVATFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSEHGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTVEEELALMNAHSIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYIATGRLPPISKNNTQVVVRDSIRPSATKTLLVSSNKELNGAVETSSETTAISKLDDSGKNRLESSEIVREVGDSSSVPANESADSDCVECNPGSSNIDLNCGCSEPLSGANHGVTCGPKFENSGLNRNLTITHFANNGEMSSSRLIRTSLPQESPSCGSLCYEPPYLEGSVPLDSLSLNNLCLHNESMLSPISLFTPPSVKGSELCRESPESILKKAANTFPNTPSILRRRRTGVLSETSPTKVLKLDNGLQASNEPARYYGKSGSEVGRFAESPVGHGNESDIPNSKAFNASPPYRLRSKRTAVIKCVEKQLEFAFDKEKNDCSINAMEKSGKRNNVMSEDCLHDTKLVVT* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1309 567 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Lan7g1309 567 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
Lan7g1309 567 SMART sant 110 159 IPR001005 -
Lan7g1309 567 SMART sant 58 107 IPR001005 -
Lan7g1309 567 SMART sant 162 210 IPR001005 -
Lan7g1309 567 MobiDBLite consensus disorder prediction 254 268 - -
Lan7g1309 567 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Lan7g1309 567 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Lan7g1309 567 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Lan7g1309 567 PANTHER MYB PROTEIN-RELATED 23 313 - -
Lan7g1309 567 PANTHER MYB PROTEIN-RELATED 362 481 - -
Lan7g1309 567 PANTHER MYB-RELATED PROTEIN B-LIKE 23 313 - -
Lan7g1309 567 PANTHER MYB-RELATED PROTEIN B-LIKE 362 481 - -
Lan7g1309 567 CDD SANT 113 157 IPR001005 -
Lan7g1309 567 Gene3D - 58 110 - -
Lan7g1309 567 Gene3D - 111 162 - -
Lan7g1309 567 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Lan7g1309 567 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Lan7g1309 567 MobiDBLite consensus disorder prediction 254 274 - -
Lan7g1309 567 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Lan7g1309 567 CDD SANT 62 105 IPR001005 -
Lan7g1309 567 Gene3D - 164 232 - -
Lan7g1309 567 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Lan7g1309 567 CDD SANT 165 208 IPR001005 -
Lan7g1309 567 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Lan7g1309 567 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1309 Lan-Chr7 18160250 18165645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1309 2 546 MYB Transcription Factor Family AT3G09370 49.104 1.37e-151 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g1309 Myb_DNA-binding 9.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1309 K09422 - gmx:778081 863.988