Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1297 ATGAATTATAATAATATGGAGTTAGAAGGTGTAGATCTGCATGTACAAGAGGTTGTTACTAGAGAGAATATTAGTAATAATCACCACCTTGTTGTTGGTTTTGAAGAAACTTTTGGTGCTTCTGAGAGAGATATGTGGCTGAACAATGATGATCAAGATGATCTTCTTGGTGTGAATGATCCTTCCATGTTCTATGCAGATTTCCCTTCTCTTCCTGATTTCCCATGCATGTCTTCATCTTCCTCTTCTTCACCAACTCCTGCACTTCCTATTAAGACCACAACTTGCACCACCACAACCACAACCACCTCATCTTCTTCGTCGTCTTCGGCGGCTTCTTGGGCTGCTCTGAAGTCAGGACAGCCCAGTATACGAGACTCTCACCTAATGGGGTCTGATGAGACTGTTTTGAAGTCAGATTTTGAGCAAAACAACTACCATTGTTACATGCAACATCAGAATCATCACCAGCTGCATGATTTGGATGATATAGGAACTGAAAACTTGTCCTCAACTGCATCCATGGAGGTTTCTCAACAGCACCAAAACCATGATCCTGGTCTTGATGGTACGGTTGGAGATTGCATGGATGAAGTGATGGGTTTTGGGTACATGGAGCTTTTTGAGGGAAATGATTTTTTTGATGCAGCATCTATTCTCCAGAGTGAAGAAAACCCTTTTGGGGTATTCACACAGGATCAAATGGTGCCAGTGCCACAGCAAGAGGAACATCATAATCAACATGCAATGGTACCACAGCATCATCATTATCAAGAATCTACACCACTACCACATCAAGGTATGACAAATGAAGAAGAGAATAATCATAACCAAGCTCTTATGTGTCCCCCTATTATTACCAATAACGATAATGAAGAGATCATCCAAGGAGAAGGTGGTGCAACTGGTGCTGGTGTAGATGATGAAATGAGTAATGTTTTCTTGGAATGGCTCAAGAATAACAAGGATAGTGTTTCTGCTAATGATTTGAGGAGTGTGAAGCTGAAAAAAGCAACAATAGAAAGTGCTGCAAGGCGTTTAGGTGGAGGTAAAGAAGCCATGAAGCAATTGTTGAAGCTTATACTTGAATGGGTTCAAACTAGCCATCTTCAGAATAGAAGGCCAAAGGATCCACTCACACATTTTCAGGGTCCTATTCAAAGCCAAAACAGAAACAACACTAGTTCCAATCTGAAGAATGCACCTGATCTATCAAACACTTGTTTCAACCAAACACCTTGGGTGTCTGTGTCTGAACAAAATTATGGAACAACAACAGATCAAGCTCCTCTTATGGCAACTCCTCAACCATTTCCACAACAAATGGTTGGTGCTGCTTCAAATAATCATAACCCTTATCAACCTGGTGCTGAATATCAAATGCTGGATTCAACACCTTCATGGCCTCCTTCTCAGTTCACAACTGTTGCTAATTCTCAATATAATCAGTCATTTGGGGACAACAATCTTCACACTCAAAAGCCATCTGCGGTGACTGCAATTGATGGCTATGGAAATCAATACCCTTATCTGTTTTTCCCCCATAGCCCTGGTGGTGATAGGTTGATGAGATTAGGCCCCTCGGCGACCAGAGAAGCAAGGAAGAAGAGGATGGCAAGGCAGAGAAGGCTTTTGGCTCATCACAGGCACAATCACAACGATATTAATCAACTCTCAGGTTCACATGCAAGGTTGGGAAGTGATAATTGCACTGCTATGTTGGCTCCTGCACATGCAAATCAAGCCAATTGGGTGTATTGGCAGACTATGTCTGGTGGGGCTGCTCCTATGGCACAGGTGGTTCCTTCAGAGCCGCAGGCAGTACAACAGGTGGTGGATTGGACTGCCATGCAAACCCAGAATACACAGAATTATCATCAAGGCCGAGTCTCATCGGAAAAGCGACAACAGGGTTGGAAGCCTGAGAAGAACTTGAAGTTTCTTCTACAAAAGGTGTTAAAGCAAAGCGATGTCGGAAGCTTGGGGAGAATTGTTTTGCCGAAAAAAGAAGCAGAAACCCACTTGCCAGGACTTGAGGCAAGAGATGGAATTTCCATAACAATGGAAGATATCGGTACTTCTCGCGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGAATGTATTTGCTTGAGAACACTGGGGACTTTGTAAAAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATATTCGGATGTGAAGTGTGGAAAATTTATGATAAGAGGAGTGAAAGTGAGGCAACAAGGGACAAAACCAGAGACCAAGAAAGCATTAAAGTCTCAGAAAAACCAGCATGGAAGTAATGCTGCAACCATAGCTGGTGCTGCTATTAATAATAATGTCACACCATCTTCACCTAAGCAGAAAAATGAAAAGCTAGTCAAATAA 2403 0.4241 MNYNNMELEGVDLHVQEVVTRENISNNHHLVVGFEETFGASERDMWLNNDDQDDLLGVNDPSMFYADFPSLPDFPCMSSSSSSSPTPALPIKTTTCTTTTTTTSSSSSSSAASWAALKSGQPSIRDSHLMGSDETVLKSDFEQNNYHCYMQHQNHHQLHDLDDIGTENLSSTASMEVSQQHQNHDPGLDGTVGDCMDEVMGFGYMELFEGNDFFDAASILQSEENPFGVFTQDQMVPVPQQEEHHNQHAMVPQHHHYQESTPLPHQGMTNEEENNHNQALMCPPIITNNDNEEIIQGEGGATGAGVDDEMSNVFLEWLKNNKDSVSANDLRSVKLKKATIESAARRLGGGKEAMKQLLKLILEWVQTSHLQNRRPKDPLTHFQGPIQSQNRNNTSSNLKNAPDLSNTCFNQTPWVSVSEQNYGTTTDQAPLMATPQPFPQQMVGAASNNHNPYQPGAEYQMLDSTPSWPPSQFTTVANSQYNQSFGDNNLHTQKPSAVTAIDGYGNQYPYLFFPHSPGGDRLMRLGPSATREARKKRMARQRRLLAHHRHNHNDINQLSGSHARLGSDNCTAMLAPAHANQANWVYWQTMSGGAAPMAQVVPSEPQAVQQVVDWTAMQTQNTQNYHQGRVSSEKRQQGWKPEKNLKFLLQKVLKQSDVGSLGRIVLPKKEAETHLPGLEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQGTKPETKKALKSQKNQHGSNAATIAGAAINNNVTPSSPKQKNEKLVK* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1297 800 Pfam B3 DNA binding domain 650 746 IPR003340 GO:0003677
Lan7g1297 800 SUPERFAMILY DNA-binding pseudobarrel domain 648 744 IPR015300 -
Lan7g1297 800 ProSiteProfiles B3 DNA-binding domain profile. 649 751 IPR003340 GO:0003677
Lan7g1297 800 CDD BfiI_C_EcoRII_N_B3 647 748 - -
Lan7g1297 800 SMART B3_2 649 749 IPR003340 GO:0003677
Lan7g1297 800 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 781 IPR044800 GO:0003700
Lan7g1297 800 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 42 781 - -
Lan7g1297 800 MobiDBLite consensus disorder prediction 372 405 - -
Lan7g1297 800 MobiDBLite consensus disorder prediction 766 794 - -
Lan7g1297 800 MobiDBLite consensus disorder prediction 382 405 - -
Lan7g1297 800 Gene3D - 645 766 IPR015300 -
Lan7g1297 800 MobiDBLite consensus disorder prediction 78 112 - -
Lan7g1297 800 MobiDBLite consensus disorder prediction 754 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1297 Lan-Chr7 17961877 17966725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1297 43 768 B3 DNA Binding Superfamily AT3G24650 42.656 5.62e-148 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan7g1297 B3 1.1e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1297 - - lang:109363285 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1297 7 17961877 17966725 Lan13g1086 13 16193270 16198850 LSH