Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1296 ATGGCTAAGTTTTTGAGGCAAATACCAATGTCAATGCCGAGGCAAACCTTGAGCCACAACCACCACCAAATGCCGAGGCAAGTTTTCATCACAAACCATCTTCTTCACTATCTTCTTCTCTTTTCACTTCTTCCTTTTCCTTCTTATGCTGCAAACAATGAAGTTACTACTTTGCTTTCATGGGTTCATACCTTTTCCAAAACCATTGTTCCTTCACCTTTTTCTAACTGGAACCCTTTTGATTCTACTCCATGCAACTGGTCTTACATAAAATGTTCATCACAAAACCATGTCATTGAGATAAATATTCAAGCTTTTGAGCTAGCCCTAACATTTCCTTCAAATATTTCATCACTTCCTTTCCTTCAAAAGCTTGTAATATCTGATGCTAATCTCACTGGAACTATCTCATTTGATATTGGTGATTGCATGGATCTTATAGTCATTGATCTTAGCTCAAATAGTCTTGTTGGTAACATTCCTTCAAGTATAGGCAAACTCAAAAAACTCCAATACTTGAGTTTGAACTCTAACCAGCTCAGTGGTGCAATCCCAATGGAGATTGGTTATTGTGTTAGTCTTATAAACCTTGACATATTTGATAACAATCTCAGTGGTGTTATTCCTTTTGAGCTTGGAAATCTTTCAAGTCTTGAGGTTCTAAGAGCTGGTGGGAATAAAGATATTGTTGGGAAGATTCCAGAAGAGCTTGGTGAGTGTAGAAATTTGACTATATTAGGTCTTGCTGATACTAAAATTACTGGTTCAATACCTGCTTCATTAGGTAAGTTAAGTAAACTTCAAACCATGTCTATTTATAGCACTTTACTCTCTGGTGAGATTCCACCTGAAATAGGAAACTGTTCAGAGCTTGTGAACTTGTTTTTGTATGGAAATGATTTATCTGGGTCATTGCCAAAAGAGCTAGGAAGGCTTCAGAAGCTGGAAAAATTGTTGCTTTGGCAGAATAGTATTGTTGGGAACATACCTGAAGAAATAGGAAACTGCAAAAGCTTGAAAGTTTTTGATGTTTCCTTAAATTCTTTGTCTGGTAGTATACCTCAAAGTTTGGGGAAACTCTCAAATCTTGAAGAGATTATGCTAAGTAACAATAACATCTCTAGTTCAATACCACCTTGTCTTTCAAATCTCACAAACCTTGTGCAGTTGCAGTTAGATTGTAATCAGATATCAGGTTCAATTCCACCTGAACTTGGAAAGTTAACAAAGTTAACAGTGTTTTTTGCTTGGCAGAATAAGCTTCAAGGTTCAATTCCATCAGCATTGGGTGATTGTTTAAGCCTTGAAGCTTTGGATTTGTCATACAATGCACTCACAGGTAGCTTACCCCCTGGCCTGTTTAAGCTTCAGAATTTAACAAAGCTTCTATTAATCTCCAACGACATTTCGGGCCCTATCCCTCCTGAGATTGGTAACTGCAGTTCTCTAATTCGACTTCGGCTTGTGAACAACAGGATCAGTGGACAGATACCAAGAGAAATTGGTTCTCTTATTAACCTCATTTTCCTTGATCTGTCCGAAAATCATCTTACTGGATCAGTACCACCTGAGATTGGAAATTGCAAAGAACTTCAAATGCTGAATCTAAGCAATAACTCCCTTTCTGGTACCTTTCCTAGTGGTTTATCTTCTGTCACAAGGCTTGAGGTCTTGGATGTTTCTATTAATCAGCTTTCGGGTGAGATTCCAACGAGTATCGGCGAACTCACTTCACTTCTTAGACTCATCCTAAGCAAAAATTCTTTCTCAGGATCCATTCCCTCATCACTTGGGCAATGTTCAAGTCTTCAATTGCTAGACCTTAGTAGTAACATGTTCTCAGGGAGCATCCCATCAGAACTGTTTGAAATTGAAGCACTTGACATTGCTCTAAACTTGAGTCACAATGCATTATCTGGATCAATCCCACCAGAGATTTCAGCTTTGAACAAGCTGTCAATTCTCGACCTTTCACACAACAAACTCGAAGGTGACTTGATGGCGTTTTCAGCCCTCGAAAATCTTGTTTCTCTTAATGTTTCCTACAACAATTTCAGTGGTTATCTACCAGACAACAACTTGTTCCACCAATTATCACAAACAGATTTGGAAAGCAATCAAGGTTTGTGTCCTAAGGGTCATGATTCCTGTTTCATTAGCGATGCTGCAAAAACAAAAAAGCGTAATAGTACTAGTTCTAAGAGGTCAGAGATGATCAACCTGGCCATTGGATTGCTCAGTGCCTTGACTGTTGCAATGGCAATATTCGGAGTTCTCGCAGTCATTCGAGCAAGGAAAATGGTTCGAGATGACAACGATTCTGAGATGGGAGAGGATTCAGCATGGCCATGGCAGTTCACTCCATTTCAAAAGGTAAATTTCTCAGTGGAACAAGTTTTGAAATGTTTGGTGGAATCCAATGTAATTGGAAAAGGGTGTTCGGGGATCGTATATCGCGCAGAAATGGAAAATGGGGATGTCATTGCTGTGAAAAAACTATGGCCAACAACATTGGCTGCTAGATATGATTGTCAAAATGACAAGCTAGCAGTTAATGAAGGAGTTCGTGATTCGTTTTCAGCCGAGGTAAAAACTCTCGGTTCGATTCGCCACAAGAACATTGTCAGGTTCTTAGGATGCTGTTGGAACAAAAATACAAGATTGCTTATGTATGACTACATGTCAAATGGGAGTCTAGGAGGTCTACTTCATGAAAGAACTGGAATCTGCTTGGAATGGGACATCCGATTTCGGATAATACTAGGAGCAGCTCAAGGATTGGCTTATTTACACCATGATTGTGCCCCTCCCATTGTTCACAGAGACATTAAGGCCAACAACATCCTTATTGGCCCTGAATTTGAACCATACATTGCTGATTTTGGTCTTGCCAAACTTGTTGATGATGGAGATTTTGCAAGATCTTCTAGTACACTAGCTGGTTCCTATGGTTACATAGCTCCTGAATATGGTTATATGATGAAGATAACAGAAAAAAGTGATGTATACAGCTATGGCATTGTTGTATTAGAAGTACTAACAGGAAAACAACCAATTGATCCAACAATACCAGATGGACTCCACATTGTTGATTGGGTAAGACATAAAAGAGGTGGAGTTGAAGTTCTTGATCAAAGCTTACTCACTAGGCCAGAATCTGAAGTTGAAGAAATGTTGCAAACCCTAGGTGTAGCTTTGTTGTGTGTGAACTCAAGAACAGATGATAGACCAACAATGAAAGATGTTGTAGCAATGATGCAAGAAATTAAGCAAGAAAGAGAGGAATATATGAAAGGTGGCAACAACATGCTTCTTAATGGTTCTTCTGCAAATAATCAACAGCAAAATAATCATTCCAATGGTAATGTAACTTTGGATTAG 3381 0.3883 MAKFLRQIPMSMPRQTLSHNHHQMPRQVFITNHLLHYLLLFSLLPFPSYAANNEVTTLLSWVHTFSKTIVPSPFSNWNPFDSTPCNWSYIKCSSQNHVIEINIQAFELALTFPSNISSLPFLQKLVISDANLTGTISFDIGDCMDLIVIDLSSNSLVGNIPSSIGKLKKLQYLSLNSNQLSGAIPMEIGYCVSLINLDIFDNNLSGVIPFELGNLSSLEVLRAGGNKDIVGKIPEELGECRNLTILGLADTKITGSIPASLGKLSKLQTMSIYSTLLSGEIPPEIGNCSELVNLFLYGNDLSGSLPKELGRLQKLEKLLLWQNSIVGNIPEEIGNCKSLKVFDVSLNSLSGSIPQSLGKLSNLEEIMLSNNNISSSIPPCLSNLTNLVQLQLDCNQISGSIPPELGKLTKLTVFFAWQNKLQGSIPSALGDCLSLEALDLSYNALTGSLPPGLFKLQNLTKLLLISNDISGPIPPEIGNCSSLIRLRLVNNRISGQIPREIGSLINLIFLDLSENHLTGSVPPEIGNCKELQMLNLSNNSLSGTFPSGLSSVTRLEVLDVSINQLSGEIPTSIGELTSLLRLILSKNSFSGSIPSSLGQCSSLQLLDLSSNMFSGSIPSELFEIEALDIALNLSHNALSGSIPPEISALNKLSILDLSHNKLEGDLMAFSALENLVSLNVSYNNFSGYLPDNNLFHQLSQTDLESNQGLCPKGHDSCFISDAAKTKKRNSTSSKRSEMINLAIGLLSALTVAMAIFGVLAVIRARKMVRDDNDSEMGEDSAWPWQFTPFQKVNFSVEQVLKCLVESNVIGKGCSGIVYRAEMENGDVIAVKKLWPTTLAARYDCQNDKLAVNEGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGGLLHERTGICLEWDIRFRIILGAAQGLAYLHHDCAPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRHKRGGVEVLDQSLLTRPESEVEEMLQTLGVALLCVNSRTDDRPTMKDVVAMMQEIKQEREEYMKGGNNMLLNGSSANNQQQNNHSNGNVTLD* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1296 1126 MobiDBLite consensus disorder prediction 1102 1126 - -
Lan7g1296 1126 Pfam Leucine rich repeat 314 373 IPR001611 GO:0005515
Lan7g1296 1126 ProSiteProfiles Leucine-rich repeat profile. 362 385 IPR001611 GO:0005515
Lan7g1296 1126 Pfam Protein kinase domain 805 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1296 1126 SMART serkin_6 803 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1296 1126 SMART LRR_typ_2 432 456 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 384 408 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 360 383 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 167 191 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 672 697 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 504 528 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 576 600 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 601 624 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 312 336 IPR003591 -
Lan7g1296 1126 SMART LRR_typ_2 649 671 IPR003591 -
Lan7g1296 1126 SUPERFAMILY Protein kinase-like (PK-like) 782 1086 IPR011009 -
Lan7g1296 1126 Gene3D Transferase(Phosphotransferase) domain 1 894 1111 - -
Lan7g1296 1126 SUPERFAMILY RNI-like 110 398 - -
Lan7g1296 1126 Gene3D Ribonuclease Inhibitor 449 545 IPR032675 -
Lan7g1296 1126 Gene3D Ribonuclease Inhibitor 630 717 IPR032675 -
Lan7g1296 1126 Gene3D Ribonuclease Inhibitor 352 448 IPR032675 -
Lan7g1296 1126 Gene3D Ribonuclease Inhibitor 546 629 IPR032675 -
Lan7g1296 1126 Gene3D Ribonuclease Inhibitor 227 351 IPR032675 -
Lan7g1296 1126 SMART LRR_sd22_2 552 578 - -
Lan7g1296 1126 SMART LRR_sd22_2 360 386 - -
Lan7g1296 1126 SMART LRR_sd22_2 312 331 - -
Lan7g1296 1126 SMART LRR_sd22_2 167 182 - -
Lan7g1296 1126 SMART LRR_sd22_2 649 677 - -
Lan7g1296 1126 SUPERFAMILY RNI-like 377 698 - -
Lan7g1296 1126 PRINTS Leucine-rich repeat signature 435 448 - -
Lan7g1296 1126 PRINTS Leucine-rich repeat signature 649 662 - -
Lan7g1296 1126 Pfam Leucine rich repeat N-terminal domain 51 93 IPR013210 -
Lan7g1296 1126 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RCH1 27 1105 - -
Lan7g1296 1126 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 27 1105 - -
Lan7g1296 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Lan7g1296 1126 ProSitePatterns Protein kinases ATP-binding region signature. 809 832 IPR017441 GO:0005524
Lan7g1296 1126 Gene3D Ribonuclease Inhibitor 50 226 IPR032675 -
Lan7g1296 1126 ProSiteProfiles Protein kinase domain profile. 803 1097 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1296 1126 Gene3D Phosphorylase Kinase; domain 1 787 893 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1296 Lan-Chr7 17942488 17947028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1296 46 1100 Receptor kinase-like Gene Family AT5G56040 47.672 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan7g1296 Pkinase 7.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1296 - - gmx:100815339 1705.65