Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1291 ATGGCAGTGATAGATCATGAAGAGAATGAGGATCGGAAAACAAATCTCTCAAAAGTACCAACCGCTGAATCATCGTCCGCCACTGCTGAAAATGAAACTTCCGACGGCTTTGAAACCGCCAGCGACGGCGATGATGGTGAAGAACAGATGAAACAGGGTGTTCCACCGATAACCGATTCCGCCTCGAACAATGAGGAACTCGTACAGGAAGCATTGGCTCAAGCAAATGAAGCAAAGGTAGAAGGGAACAAACTTTTTGTAGATGGACAGTTTGAGGAAGCATTATTACAATATGAACTTGCTTTACAAGTTGCCCCCGACATGCCTTCATCTGTGGAAATACGTTCAATATGTCATGCAAACCGTGCTGTGTGTTTTGTGAAACTGGGAAAATATGATAACACAATTAAAGAATGCACAAAAGCATTAGAGCTAAATCCTGTGTATGTTAAAGCTTTGATAAGAAGAGGAGAGGCTCATGAAAAACTTGAACATATTGAAGAGGCCATTTCTGATATGAAAAAGACGTTAGAAATTGATCCCTCAAATGATCAGGCTAGGAAAACCATTCGCCGGCTGGAGCCCCTTGCTGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATCGAAAAACTAAAAGAAATGGGCAACTCTGTCTTGGGCCGCTTTGGGATGAGCATAGACAACTTTAAAGCAGTCAAAGATCCAAACACTGGTTCCTATTCCATGTCATTCCAACGCTAA 744 0.4234 MAVIDHEENEDRKTNLSKVPTAESSSATAENETSDGFETASDGDDGEEQMKQGVPPITDSASNNEELVQEALAQANEAKVEGNKLFVDGQFEEALLQYELALQVAPDMPSSVEIRSICHANRAVCFVKLGKYDNTIKECTKALELNPVYVKALIRRGEAHEKLEHIEEAISDMKKTLEIDPSNDQARKTIRRLEPLAAEKREKMKEEMIEKLKEMGNSVLGRFGMSIDNFKAVKDPNTGSYSMSFQR* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1291 247 Coils Coil 61 81 - -
Lan7g1291 247 Pfam Tetratricopeptide repeat 151 183 IPR013105 -
Lan7g1291 247 SMART tpr_5 116 149 IPR019734 GO:0005515
Lan7g1291 247 SMART tpr_5 75 108 IPR019734 GO:0005515
Lan7g1291 247 SMART tpr_5 150 183 IPR019734 GO:0005515
Lan7g1291 247 ProSiteProfiles TPR repeat profile. 150 183 IPR019734 GO:0005515
Lan7g1291 247 SUPERFAMILY TPR-like 68 194 IPR011990 GO:0005515
Lan7g1291 247 MobiDBLite consensus disorder prediction 18 36 - -
Lan7g1291 247 Pfam Tetratricopeptide repeat 120 147 IPR019734 GO:0005515
Lan7g1291 247 MobiDBLite consensus disorder prediction 1 17 - -
Lan7g1291 247 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 24 247 - -
Lan7g1291 247 MobiDBLite consensus disorder prediction 1 60 - -
Lan7g1291 247 Gene3D Tetratricopeptide repeat domain 39 215 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1291 Lan-Chr7 17860274 17865269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1291 69 217 Calmodulin-binding Proteins AT3G25230 36.306 2.31e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1291 K24926 - gmx:100808386 325.094