Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1290 ATGGGATATGAGGAAAACTTCACCAAAGTTGGTGATAGCCAAGGAGAAGATGCAACATCAACACTTTTTCCATTTCCATGTCAATTCTGTTCAAGAAAGTTTGAGAGCTCTCAAGCTTTAGGAGGGCACCAAAATGCTCACAAGAAAGAGAGAACAGCTGCAAGAAATGCTAAGGCTTCTGAATACACATATGTTCCCTTTGCTTCCACACTCTCAACCCCTATGATTTTTGCTCCAAACCCTCAACTTGGTATCTTAGATCCTTCAATGTTTAGTACTGCCCATGCAGCAAACATCCCTTATTTCCCTCCACAAATGTCAGAATTATTTGGTTCAAATGGTGCACCTAGATTTGGGAATGCTCTATTTCTTGAGGGTAGTTCAAGAAGTAAATTCAATGAAGAAGATGATAATAGTTTCATTAATTGGCAAAGAAGCATAGGAAGCAACAACCTCAGCAGTGGTGACACATCTCAACATATATCATTGAAAAGTAACAATCAAAACATTGGAAATTGGAATGATGTTAAAGAAGAAGGGAGACAACTTGACTTATCTCTTCACTTATAG 570 0.3825 MGYEENFTKVGDSQGEDATSTLFPFPCQFCSRKFESSQALGGHQNAHKKERTAARNAKASEYTYVPFASTLSTPMIFAPNPQLGILDPSMFSTAHAANIPYFPPQMSELFGSNGAPRFGNALFLEGSSRSKFNEEDDNSFINWQRSIGSNNLSSGDTSQHISLKSNNQNIGNWNDVKEEGRQLDLSLHL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1290 189 Gene3D Classic Zinc Finger 3 69 - -
Lan7g1290 189 ProSitePatterns Zinc finger C2H2 type domain signature. 27 47 IPR013087 -
Lan7g1290 189 PANTHER PROTEIN LATE FLOWERING 15 189 - -
Lan7g1290 189 SUPERFAMILY beta-beta-alpha zinc fingers 24 52 IPR036236 -
Lan7g1290 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 25 52 IPR013087 -
Lan7g1290 189 Pfam C2H2-type zinc finger 25 50 - -
Lan7g1290 189 PANTHER ZINC FINGER PROTEIN JAGGED 15 189 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1290 Lan-Chr7 17858919 17859998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1290 25 55 C2H2 Transcription Factor Family AT5G14010 80.645 6.02e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1290 - - gmx:100792059 203.371