Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1279 ATGAACATGGTTTTTTCACTCTCACTATTTCTTGTAATCTTTCTTTTTTCTTTCCAATTTTCATATTCTTATCTATCATCATTGATAATGGGTTCCTCCCTCTTAGTGGAGAAACAAAAAGAACACATAATTGTGTCACAAAATGGTATGTTCTATGCTGGATTTTATGCCATTGGTGAAAATGCATACTCCTTTGTCATATGCTTCAATGAGTCTAATCGGAACAACGGCGCGACGATCGTTTGGATGGCGAATCGCGACCGACCCGTGAACGGAAGGCGATCAAAATTTTCCCTTTCACATAATGGTAATCTTGATTTGGTTGATGCAAGTGAATTCAACATTTGGTCTTCAAAAACAGTGTCAAATGGCATAGTGGAATTGTATCTTAGAAATGATGGTAATCTTGTGTTACATGAATTGGAAGGAAACATTCTATGGCAAAGTTTTGATCATCCAACTAATACTCTTCTTCCAGGACAACTTCTAACAAGACATACACAACTTGTATCTTCAAGAAGTGAGAGTAACCATTCAGTTGGTTTCTATAAATTATCCTTTGATGATCAAAACCTGCTTTCTCTTCTTTATGATGGCCCTGATGTATCAAGCACTTATTGGCCAGATTCTGAGTTACTAACCTTAAAATCTGGAAGATTTACCTATAATATCACTAGAATTGCAGTGCTAAATTCTCTTGGATATTTCACTTCATCAGATAATTTTACTGTTACAACATCTGATTATGGCATTGTGATACAAAGAAGATTGACATTAGATTATGATGGTAACCTTAGGGTATATAGTCTAAATGATATGTCAAATAAATGGTACATTTCATGGCAAGCCATTCCTGATTCTTGTGCAATTCATGGAATTTGTGGAGCTAATAGTACATGCAGTTATGACCCTAAAAATGGAAAGAAATGTTCATGTCTTCAAGGTTACAAAGTGAATAACTATAGTGATTGGTCTTATGGCTGCAAACCTATAGTTCCTTTTACTTGCCCTAGAAATGATTCTATGTTCTTGGAGATACCCCATGTTTCTACTTGGGGCTATGGCAACAATTGTGTGAACAATACAACCCTAAGTGGTTGTGAGAATTTGTGCTTAAAGGATTGCAATTGTCTAGGGTTTGAGTTCATATATGATGAGAAAGAAGGTTATTTCAAGTGCTATACAAAAATACAATTTCTCAATGGCCAAGATTCATCACATGTTAAATATTCAACCTACTTGAGACTACATAAAGGTCAAAAAGTTTCTAGTGGAGAATCTTTTAGGGCAAATGATCATTTGTGTGAAGTACAGATAGAGAGAGTTTATATCAAAAACCATGCACCTAGATTTGTGAACTTTATTCTTTGGATTGCTATAGCAGTTGGAGGTTTTGAAGTTATTTGCATCCTTGAGGTTTGGTGCTTCATAGTTTTGACTAGGAGAATGTCTTTACCTTCTTCTTCTGCTTCTTCTGAACAAGATCGTTATCATTTAAACACTTTTGGATTCAGAAAATTTAGTTATTCTGAGCTGAGAAGTGCAACAAAGGGTTTCAGTGAAGAGATTGGAAGAGGTGGTGGAGGTGTTGTTTACAAAGGAATATTATCAGATTCAAGACATGCAGCAATAAAGAAACTCAATGAAGCAAATCAAGGAGAAGGTGAATTCCTTGCTGAACTAAGCTTAATTGGAAGGCTTAACCACATGAATTTGATTGAAATGTGGGGATATTGCGCTGAAGGAAATCATAGAATATTGGTATATCAGTACATGGAAAATGGTTCTTTAGCAGAAAATCTCTCTTCCAACAAACTTGATTGGAGTAAAAGGTATAACATAGCTCTTGGAACAGCAAGAGTTCTATCATATCTACATGAAGAATGTTTGGAATGGATTTTGCATTGTGATATAAAGCCAGAAAATATTCTTTTGGACTCAAACTATCAACCCAAGGTAGCAGATTTTGGCTTATCTAAGTTGCTTAATAGAAATAACCTCAACAATGCAAGTTTCTCAATGATAAGAGGCACAAGGGGATATATGGCACCTGAGTGGGTTTTCAACTTAACAATTACTTCCAAAGTTGATGTTTATAGCTATGGAATTGTTCTCTTGGAGATGATAACTGGAAGGAGCCCAAGAATGGATATGCAAATAGTTGATGGAGTTGAGGTATATAATGGGAGGCTTGTAACATGGGTTAGAGATAAGAAGAGGAGTATATCTTGGTTGGAACAAATCATTGATCCTGCAATTGGGCCAAACTATGATATAAGAAAGATGGAAATTTTGGCTAGAGTGGCTTTGGATTGTGTAGAGGAAGAGAAAGATGCAAGACCAACAATGAGTCAAGTGGTTGAGATGCTTCAGAGCCATGAAAGTGATCCTCAATGA 2397 0.3584 MNMVFSLSLFLVIFLFSFQFSYSYLSSLIMGSSLLVEKQKEHIIVSQNGMFYAGFYAIGENAYSFVICFNESNRNNGATIVWMANRDRPVNGRRSKFSLSHNGNLDLVDASEFNIWSSKTVSNGIVELYLRNDGNLVLHELEGNILWQSFDHPTNTLLPGQLLTRHTQLVSSRSESNHSVGFYKLSFDDQNLLSLLYDGPDVSSTYWPDSELLTLKSGRFTYNITRIAVLNSLGYFTSSDNFTVTTSDYGIVIQRRLTLDYDGNLRVYSLNDMSNKWYISWQAIPDSCAIHGICGANSTCSYDPKNGKKCSCLQGYKVNNYSDWSYGCKPIVPFTCPRNDSMFLEIPHVSTWGYGNNCVNNTTLSGCENLCLKDCNCLGFEFIYDEKEGYFKCYTKIQFLNGQDSSHVKYSTYLRLHKGQKVSSGESFRANDHLCEVQIERVYIKNHAPRFVNFILWIAIAVGGFEVICILEVWCFIVLTRRMSLPSSSASSEQDRYHLNTFGFRKFSYSELRSATKGFSEEIGRGGGGVVYKGILSDSRHAAIKKLNEANQGEGEFLAELSLIGRLNHMNLIEMWGYCAEGNHRILVYQYMENGSLAENLSSNKLDWSKRYNIALGTARVLSYLHEECLEWILHCDIKPENILLDSNYQPKVADFGLSKLLNRNNLNNASFSMIRGTRGYMAPEWVFNLTITSKVDVYSYGIVLLEMITGRSPRMDMQIVDGVEVYNGRLVTWVRDKKRSISWLEQIIDPAIGPNYDIRKMEILARVALDCVEEEKDARPTMSQVVEMLQSHESDPQ* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1279 798 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Lan7g1279 798 Pfam D-mannose binding lectin 79 167 IPR001480 -
Lan7g1279 798 CDD STKc_IRAK 523 791 - -
Lan7g1279 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 170 IPR036426 -
Lan7g1279 798 Pfam S-locus glycoprotein domain 243 319 IPR000858 GO:0048544
Lan7g1279 798 Gene3D Phosphorylase Kinase; domain 1 482 591 - -
Lan7g1279 798 SMART blect_4 32 153 IPR001480 -
Lan7g1279 798 CDD B_lectin 44 153 IPR001480 -
Lan7g1279 798 Pfam Protein kinase domain 520 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1279 798 CDD PAN_AP_plant 332 416 - -
Lan7g1279 798 PIRSF SRK 1 798 IPR024171 GO:0004674
Lan7g1279 798 ProSiteProfiles Protein kinase domain profile. 517 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1279 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 5 795 - -
Lan7g1279 798 ProSiteProfiles Bulb-type lectin domain profile. 19 151 IPR001480 -
Lan7g1279 798 SMART serkin_6 517 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1279 798 ProSiteProfiles EGF-like domain profile. 284 322 IPR000742 -
Lan7g1279 798 Gene3D - 32 152 IPR036426 -
Lan7g1279 798 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 5 795 - -
Lan7g1279 798 SUPERFAMILY Protein kinase-like (PK-like) 497 791 IPR011009 -
Lan7g1279 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Lan7g1279 798 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Lan7g1279 798 Gene3D Transferase(Phosphotransferase) domain 1 592 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1279 Lan-Chr7 17740752 17746254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1279 503 790 Receptor kinase-like Gene Family AT3G58690 40.468 1.48e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan7g1279 Pkinase 3.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1279 - - gmx:100784287 1030.39