Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1278 ATGAGTTGCTTATCATGTTTTTCTTCTCAAGAAAAGAAAGTAACAAAGAGGCCTAACAATGGAAATAGGACAGAATATTCTGCTGCTCCACCAAAGGAATCAGCATTCCAATCTCAGCAATGGCAAGATAATAATTATCACAATGCAAGGGGCAGTCCAAAAAGAGAACCAAAAGTTAATAAGGAAGCTAACAAAGATACAGGGAACAATAACATTGCTGCACAAACATTCACATTCAGGGAATTGGCTTCTATTACAAGAAACTTTAGGCAAGAATGCCTAATAGGTGAAGGTGGATTTGGAAGGGTTTATAAAGGAAAAATTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGATAGGAATGGATTACAAGGGAACAGAGAATTCCTTGTTGAAGTGTTGATGTTGAGCCTCTTGCACCATCAAAATCTAGTGAGCTTAATTGGATATTGTGCTGATGGAGATCAGAGATTATTGGTATATGAGTACATGCCCTTAGGATCTGTTGAAGATCATTTACTTGACCTTCATCCACAGCAAAAACCTCTAGATTGGTTCACCAGAATGAAAATAGCATTGGATGCTGCAAAAGGTCTAGAATATCTGCATGACAAGGCCAATCCTCCTGTCATCTACCGCGACTTAAAATCATCGAACATCTTGCTGGACAACGATTACAACGCAAAACTTTCGGATTTTGGACTAGCCAAGCTTGGACCAACAGGGGAAGAATCTCATGTCTCATCAAGAGTTATGGGTACTTATGGATACTGTGCTCCTGAGTATCAAAGAACCGGTCAGATCACTGTAAAGTCCGATGTATACAGTTTCGGAGTTGTTTTACTTGAATTAATCACTGGAAGGAGAGCCATTGATAACACAAGACCATCAATAGAGCAAAATCTAATTTCTTGGGCATATCCAGTATTCAAAGATCGTCATCGATACCCGGAATTAGCAGATCCCCTTCTTGAAAAAAACTTTCCAATGAGATCACTTGATCAAGCAGTAGCAGTAGCAGCCATGTGCCTCAATGAGGAGCCATCAGTTAGGCCTTTGATTAGTGATGTGGTCACTGCCCTTAGTTTCCTTGGGACTCAAGACCCTGCACTACTTCCACCTATTGACATACCCGCTTCGCCGCGACAAGAGCAAGAAACTAATAATGCAGCAACATTGACTCTTCTTGACAATGATAGTGTTATGGAACGCCAAAGAGCGGTTGCTGAAGCCATTGAATGGGGTTCAAATTCGAGGAACAAAGCCGCGAATATGCGTCGAAGTGGTTCCTCTTTGCAATTCCACTACAATTGCATACAAAATGATTAG 1335 0.4082 MSCLSCFSSQEKKVTKRPNNGNRTEYSAAPPKESAFQSQQWQDNNYHNARGSPKREPKVNKEANKDTGNNNIAAQTFTFRELASITRNFRQECLIGEGGFGRVYKGKIEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVSLIGYCADGDQRLLVYEYMPLGSVEDHLLDLHPQQKPLDWFTRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDNDYNAKLSDFGLAKLGPTGEESHVSSRVMGTYGYCAPEYQRTGQITVKSDVYSFGVVLLELITGRRAIDNTRPSIEQNLISWAYPVFKDRHRYPELADPLLEKNFPMRSLDQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTQDPALLPPIDIPASPRQEQETNNAATLTLLDNDSVMERQRAVAEAIEWGSNSRNKAANMRRSGSSLQFHYNCIQND* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1278 444 SMART serkin_6 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1278 444 MobiDBLite consensus disorder prediction 49 63 - -
Lan7g1278 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Lan7g1278 444 MobiDBLite consensus disorder prediction 1 70 - -
Lan7g1278 444 Gene3D Phosphorylase Kinase; domain 1 58 165 - -
Lan7g1278 444 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 2 426 - -
Lan7g1278 444 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Lan7g1278 444 Gene3D Transferase(Phosphotransferase) domain 1 166 371 - -
Lan7g1278 444 PANTHER OS07G0668900 PROTEIN 2 426 - -
Lan7g1278 444 MobiDBLite consensus disorder prediction 1 48 - -
Lan7g1278 444 Pfam Protein kinase domain 91 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1278 444 ProSiteProfiles Protein kinase domain profile. 89 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1278 444 CDD STKc_IRAK 95 363 - -
Lan7g1278 444 SUPERFAMILY Protein kinase-like (PK-like) 75 387 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1278 Lan-Chr7 17736361 17740314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1278 1 426 Glycoside Hydrolase AT3G07070 65.035 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lan7g1278 Pkinase 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1278 - - gmx:100786405 695.271