Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1274 ATGGCTGATGATTTCTATGAATGGGATGCTGATAAAATGCTTGATGTTTATATTCATGATTATCTTCTGAGAAATAAGTTGCATAAGTCAGCAAATGCTTTCAAGACCGAAAGCAAACTTCCGGATCGTACACCCCCAATAGAGAATACACCACAAGGATTTCTGTATGAGTGGTGGTTTGTCTATTGGGACATATACCTCGCGAAGCGGTTTAATCAACAATGCTCTGCCCCGGCTGCAGCTTACATTGAGACCCTGAAAACGAAGGCAAGAGAACGTCAACTTCAAATGCAGCAATCGCAAGTAACGCCGAAGCACACGGAACAGTTACAGGAAAGAGACTTAAATGCCATGAACTCTAAAGGAATGATGAGGCCGCCACCAGCAATTGTGTTAGCCGCGAAAATGTTTGAAGAACGAATGCAACACTCGAATTCAATGAGTTCTGCGGCATCTCTAACTCCTATGGATGCCTATAGGATGAACTTACCTAAACCAGCAACAAGTCATCAAGGCCAACTGGTTCGTGATCTTTCAGGAAACGCGTCTACCTCAGTACAGCAGGTTCAGACGCAATCTGGCGTTGAACGAGAAGTTAACTTGGGAGGCACTCCAACGAGTTTTCCTATGGATCAATCAGGTTTTCAACAAACAATGTTACAATCGGATTCTGTGCTAGGCGATGCAGGAAATACAAGTCTTCCGCTGAAGGGCTTGACTCGCGCTGGAATTGATCGACCAACATCTAGTTTAGGTGTACAGGTTCAGATGCCTAATTTGCGAAATAAAAACAAAATTCTGGATTCAGAATGGCAGCGGGTCACGGCAAGGGCTCAGGCAATACTGAGTTCAAAGTATGGTCAGTCTGATAGGACCCGATTGCAGTCAGGTTCTCCCGAGGTGAATATGGCGCGGGCGCAACATTCGTTATCTCAACAGCAGGGGCAATTGCAGCAGAACGATAGAAAAAGAAAACAGTCTACCTCTCTCGGAGCTGCGAATATCAATGTCGGTGGGAACAGAGTGAATCCTTCACCTATCTCACCACCATTACTGGACACACCTGTTGATGGAATTAATACAGAAAGCAGCATGCAACATGTTAACAATGTGCCAAAAAGCATGATAATGGATGATATAAATTTACTGGAGAACATGGAATGGTTTGCTGAGATTGGTACTTCAGGTGATAACATGGAGCTCTTTCAATCAAACGACGGAGAAGGTGGGAATGCCTATGGAACAATAAAGCAATCTGATATAATTTCAGGTTTCTCCTTTGCTGAACTAAATTGCATAAGAACAAGCAACAGCAAAATTACTTGCTGTGACTTTTCTTCGGATGGAAAGTTTCTTGCCAGTGCTGGACATGACAAGAAGGTTTTCATATGGAATATGGAGACTTTGCAGACAGAGATCACTCCCGAGGATCACAAATCAGTTATTTCGGATGTCCGTTTTAGACCAAATTCTTCTGGGTTGGTGTCATCCTCTTTTGATAATGTCGTGCGGTTATGGAATGCAGCTAACCCAAAATATTGTGTGGAAGAATTTAGTGTGCACAATTCAGCTGTTATGTCACTCGACTTCCACCCGAAGAAAACTGATCTTCTCTGTGTCGCTGACATTGAAAGTGAAATTCAGTACTGGGACATTACTACATTCTCCTTTATCCGTTCCTTTAAGGGTGGTAATGCAAAAGTGAGGTTTCAGCCTAGAGTAGGACAGGTACTGGCAGCGGCCTATGATAATGGAGTATCGATTTTTGACGCTGAGACTGGCATACAAATTTACGCACTCCAGGGTCATCCTGAGGAGGTGAACTATATTTGCTGGGTTGCAAATGGAGACATCTTGGCATCGGTGAGCCGTAATTTCGTCAAGTTTTGGTCATTGTCGTCCGGAGAATACATTAAAGGGCTCAGGTCCAGTGGAGAGCAATATTATTCCTGTGTTTTTCATCCAAGCTATTCAAATATATTGGTGATTGGAGGAACTACTAACATTGAACTGTGGAATTTAGCTGAGGACAAAAGCATGACAATTCCTACAGACCAGAATATAATATCTTGTTTGGTTCAGTCTCCTGTCACTGGAATTGTTGCATCTGCAAGCCATGACTGCACTGTCAAGTTATGGAGATAA 2145 0.4312 MADDFYEWDADKMLDVYIHDYLLRNKLHKSANAFKTESKLPDRTPPIENTPQGFLYEWWFVYWDIYLAKRFNQQCSAPAAAYIETLKTKARERQLQMQQSQVTPKHTEQLQERDLNAMNSKGMMRPPPAIVLAAKMFEERMQHSNSMSSAASLTPMDAYRMNLPKPATSHQGQLVRDLSGNASTSVQQVQTQSGVEREVNLGGTPTSFPMDQSGFQQTMLQSDSVLGDAGNTSLPLKGLTRAGIDRPTSSLGVQVQMPNLRNKNKILDSEWQRVTARAQAILSSKYGQSDRTRLQSGSPEVNMARAQHSLSQQQGQLQQNDRKRKQSTSLGAANINVGGNRVNPSPISPPLLDTPVDGINTESSMQHVNNVPKSMIMDDINLLENMEWFAEIGTSGDNMELFQSNDGEGGNAYGTIKQSDIISGFSFAELNCIRTSNSKITCCDFSSDGKFLASAGHDKKVFIWNMETLQTEITPEDHKSVISDVRFRPNSSGLVSSSFDNVVRLWNAANPKYCVEEFSVHNSAVMSLDFHPKKTDLLCVADIESEIQYWDITTFSFIRSFKGGNAKVRFQPRVGQVLAAAYDNGVSIFDAETGIQIYALQGHPEEVNYICWVANGDILASVSRNFVKFWSLSSGEYIKGLRSSGEQYYSCVFHPSYSNILVIGGTTNIELWNLAEDKSMTIPTDQNIISCLVQSPVTGIVASASHDCTVKLWR* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1274 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 433 474 IPR001680 GO:0005515
Lan7g1274 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 682 714 IPR001680 GO:0005515
Lan7g1274 714 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 7 714 - -
Lan7g1274 714 SUPERFAMILY WD40 repeat-like 428 713 IPR036322 GO:0005515
Lan7g1274 714 ProSitePatterns Trp-Asp (WD) repeats signature. 452 466 IPR019775 -
Lan7g1274 714 CDD WD40 433 714 - -
Lan7g1274 714 Gene3D - 253 571 IPR015943 GO:0005515
Lan7g1274 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 682 714 - -
Lan7g1274 714 Pfam WD domain, G-beta repeat 474 507 IPR001680 GO:0005515
Lan7g1274 714 Pfam WD domain, G-beta repeat 432 465 IPR001680 GO:0005515
Lan7g1274 714 Pfam WD domain, G-beta repeat 694 713 IPR001680 GO:0005515
Lan7g1274 714 Gene3D - 572 714 IPR015943 GO:0005515
Lan7g1274 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 433 468 - -
Lan7g1274 714 MobiDBLite consensus disorder prediction 285 327 - -
Lan7g1274 714 Pfam LisH 12 38 IPR006594 GO:0005515
Lan7g1274 714 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 475 507 - -
Lan7g1274 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 518 560 IPR001680 GO:0005515
Lan7g1274 714 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 7 714 IPR044716 GO:0003714
Lan7g1274 714 SMART WD40_4 511 551 IPR001680 GO:0005515
Lan7g1274 714 SMART WD40_4 675 714 IPR001680 GO:0005515
Lan7g1274 714 SMART WD40_4 468 507 IPR001680 GO:0005515
Lan7g1274 714 SMART WD40_4 554 590 IPR001680 GO:0005515
Lan7g1274 714 SMART WD40_4 593 631 IPR001680 GO:0005515
Lan7g1274 714 SMART WD40_4 634 673 IPR001680 GO:0005515
Lan7g1274 714 SMART WD40_4 426 465 IPR001680 GO:0005515
Lan7g1274 714 ProSiteProfiles Trp-Asp (WD) repeats profile. 475 507 IPR001680 GO:0005515
Lan7g1274 714 ProSiteProfiles LIS1 homology (LisH) motif profile. 10 42 IPR006594 GO:0005515
Lan7g1274 714 SMART Lish 10 42 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1274 Lan-Chr7 17652431 17671672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1274 513 713 Miscellaneous Gene Families AT5G08390 25.121 3.58e-08 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Lan7g1274 WD40 0.062 CL0186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1274 - - lang:109352545 1320.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g1274 7 17652431 17671672 Lan13g1076 13 16042299 16048732 LSH