Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1264 ATGAAAGATCGTCGAAGGGGAGCAATTTATAATCAAATGTCAAGTTTGGACAATAGTCGAGAAAAACTAACTGGCTTGACCCTTGATGACGTTTTAGCCAATCAAAAGAGATTATCTAGCACACCACCTAAAGAATCAAAGAGTCGGACTCTCCTAGATATCATCAAAGAAGACGATAGTAACAAAAAGGATCGCAGATCGTGGAAAGCTTTTCAGGACACACTTAGACTAAAGCTTGCAGGCTCTGCTTGGAGATCATCAATTCATATTCCAACTTCCGACCCAATTATTTCTAGTCCTAATCCTAATCCTATTCCTGCCGAATCGAACAATCGAAACAATCATTTTCAACACATGTCAAATAACTACAACGCTACCCAAGTCGATGATCTCAACCCTTACGACCACACCGATTCTTCTCCGGCACCATCTCCGGCACCCAGGGCTCAGTTCTCTCGCCGGAGCTCCACCCGTTACGGATCTCCGGCCGACTCTCCCGACGACACCGCAACCGGAGGAGGACTTCTCCGGCCACAGTTATCCCGGAGAAACTCCACCACCGTACCGTCGCAGTCGGAACCGTACCGGCGAGGGAGGGTGGTGACATTCCGAGACAATTTCGACGACGATGATTCGGACGATGAAAGGAACCAAAGTGAAGGGAGGACAATGTCAGCAAGGGAGGCGGTGGCGGCGCAGGAGGCGTCAGAGGCGGCGGCGGCAGAAGCGGAGATGGCGGCGGAGGAGGAAGAAGAAGAGAGACCCATGACAATGTCGTTGATGGATTTGTTAGAAGAGACTGATAGAGAAATGGGTCTTGAAGGATCAAGGTATATATTGAGTGATGATGAAGATTTTGATGAAGAAGATGAAGATTTTGATGAAGATTGTGATGATGATGATAATGGAGAAGGTTCTATGGAATATACTTGTTGTATTTGTATGGTGAAGCATAAAGGTTCTGCTTTTATACCTTGTGGTCACACTTTTTGCAGAATGTGTTCAAGGGAGCTTAATGTTAGTAGAGGGAATTGTCCTCTCTGCAACAATTTCATCTTGGAGATTCTTGACATTTTCTGA 1080 0.4611 MKDRRRGAIYNQMSSLDNSREKLTGLTLDDVLANQKRLSSTPPKESKSRTLLDIIKEDDSNKKDRRSWKAFQDTLRLKLAGSAWRSSIHIPTSDPIISSPNPNPIPAESNNRNNHFQHMSNNYNATQVDDLNPYDHTDSSPAPSPAPRAQFSRRSSTRYGSPADSPDDTATGGGLLRPQLSRRNSTTVPSQSEPYRRGRVVTFRDNFDDDDSDDERNQSEGRTMSAREAVAAQEASEAAAAEAEMAAEEEEEERPMTMSLMDLLEETDREMGLEGSRYILSDDEDFDEEDEDFDEDCDDDDNGEGSMEYTCCICMVKHKGSAFIPCGHTFCRMCSRELNVSRGNCPLCNNFILEILDIF* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1264 359 Coils Coil 231 253 - -
Lan7g1264 359 SMART ring_2 311 348 IPR001841 -
Lan7g1264 359 CDD RING-HC 311 348 - -
Lan7g1264 359 Pfam Zinc finger, C3HC4 type (RING finger) 309 352 - -
Lan7g1264 359 PANTHER OS01G0917900 PROTEIN 2 359 - -
Lan7g1264 359 SUPERFAMILY RING/U-box 310 355 - -
Lan7g1264 359 MobiDBLite consensus disorder prediction 103 164 - -
Lan7g1264 359 MobiDBLite consensus disorder prediction 90 255 - -
Lan7g1264 359 MobiDBLite consensus disorder prediction 178 193 - -
Lan7g1264 359 PANTHER OS01G0917900 PROTEIN 2 359 - -
Lan7g1264 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 359 IPR013083 -
Lan7g1264 359 ProSiteProfiles Zinc finger RING-type profile. 311 349 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1264 Lan-Chr7 17528872 17531470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1264 13 359 C3H Transcription Factor Family AT3G07120 37.968 9.54e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1264 - - lang:109359938 403.29