Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1246 ATGGCAATCAAAGATTCATCAATGGAGATTTACGAAATTAGCACCGAAACTGAAGGATCCGACACAGATTCAGACTGGGAGGGTTCCGAAGAAGAACCTGATTTCGAAGAAACCAATGACAAGTTCTCAAACCTCTCACTTAAGAACAAAGAAAAATCGAGGGTTGTTGAAAATAAGGGTTTGGGTACTGAGACTGAGTTAGAAGTGTTGAAGATGAGTTCACCTTCTCTGGCTGATGAAAATTTTGAGAAGGTTCAGAAAATGATTGAAGGTGGGACACCGGAGAAATTGAAGGTGGATGAATGCAAGTTGTATTTGAGGAATCATGGTCTGAGGCTCACCGGAAATAAGGAAACACTCATCCAACGCATAAAGGAACATCTAGAGATCATAAAGGGTGGAGGCGAGAAAAGGTACCCACCTTCTAGCTTTGTATTGAATTGTAAAGGTGATGCGTGCACTGGTGATGTTGTTTTGTTTGAGCAGAATGTTTATGAAATGTTTAACTTAGCATCCAGGAGTGCTAGTGGCCCACCTTGTGGCATAAGGATTGTTGCAGGCCGCATAGTGAAAGAAAGCTATGGTGCTGCCAAACAACAGCATACATTTACGATCGAAGTACTGTGGAGCAAGGGAGAAAAGCCTTTCCCTCCTCTTCATCCTCTATTGATTAAGGGTCGTAATCTTTATAGGTTGAAGACTCTGAGACAGAAATGGGAGGACGAAAGGGAAAGGCAGAGAATATTGTCGGAAAAACACTCAAGGGGAACTGTTGCTAGGGGAAACAGAGAAACAAGGATGCAAGAAAAGGAGAGGAGAAAGAAACTCAAGGAAAATAGGGTCTCCGATAAGAATTCAGTAAGGAACCAAAGTCAATCACATTCACAATATCAACCTCAAAAAGTAGACTCGCTCATTAATCCGAAGAAGCCAGCAATTCCATCTCTACACACAGGTTTATCATCCGCCGATTCAAGAAAAGCAACATACGCTACTGTAAATAAACCAGCAGCCATAACTCAACAGTATGGTAAGCCATTTGATTCTACAAGAGAGGCAATGAGATTCACTGATTCAGGAATGAGACAATTTCCTCCTCATTACATGCATAACCAGCAAGCTCGGTTCCCACTCTCAGATGCTCGCGGGAGTACTTTCGTTAGCGACCAAATCGGTAGAGCAAACTACAATTTCCCGGACTTCCATACCAGAGGAAAAACAGCTATTATTGAGGAAAACCACCACCCTTATCACAGAATGCCTTTGGGAAGTGCAAATCACTATATTCCATTGATGCATGGGAGAGAAAGATGGGAGCAAAAACAGCTGTGTAGACATTATGCACGTGGGAGGTGCTATTATGGGGACAACTGCAAATATTTACATGATTTGAGATAA 1398 0.422 MAIKDSSMEIYEISTETEGSDTDSDWEGSEEEPDFEETNDKFSNLSLKNKEKSRVVENKGLGTETELEVLKMSSPSLADENFEKVQKMIEGGTPEKLKVDECKLYLRNHGLRLTGNKETLIQRIKEHLEIIKGGGEKRYPPSSFVLNCKGDACTGDVVLFEQNVYEMFNLASRSASGPPCGIRIVAGRIVKESYGAAKQQHTFTIEVLWSKGEKPFPPLHPLLIKGRNLYRLKTLRQKWEDERERQRILSEKHSRGTVARGNRETRMQEKERRKKLKENRVSDKNSVRNQSQSHSQYQPQKVDSLINPKKPAIPSLHTGLSSADSRKATYATVNKPAAITQQYGKPFDSTREAMRFTDSGMRQFPPHYMHNQQARFPLSDARGSTFVSDQIGRANYNFPDFHTRGKTAIIEENHHPYHRMPLGSANHYIPLMHGRERWEQKQLCRHYARGRCYYGDNCKYLHDLR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1246 465 Pfam CCCH-type zinc finger 443 463 IPR041367 -
Lan7g1246 465 ProSiteProfiles Zinc finger C3H1-type profile. 438 465 IPR000571 GO:0046872
Lan7g1246 465 MobiDBLite consensus disorder prediction 16 37 - -
Lan7g1246 465 Gene3D SAP domain 83 138 IPR036361 -
Lan7g1246 465 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 8 464 IPR045124 GO:0003723|GO:0045892
Lan7g1246 465 MobiDBLite consensus disorder prediction 1 47 - -
Lan7g1246 465 MobiDBLite consensus disorder prediction 241 284 - -
Lan7g1246 465 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE 8 464 - -
Lan7g1246 465 SMART sap_9 94 128 IPR003034 -
Lan7g1246 465 ProSiteProfiles SAP motif profile. 94 128 IPR003034 -
Lan7g1246 465 SMART c3hfinal6 438 464 IPR000571 GO:0046872
Lan7g1246 465 MobiDBLite consensus disorder prediction 285 303 - -
Lan7g1246 465 Gene3D - 432 465 - -
Lan7g1246 465 Pfam SAP domain 95 128 IPR003034 -
Lan7g1246 465 SUPERFAMILY CCCH zinc finger 439 463 IPR036855 GO:0046872
Lan7g1246 465 MobiDBLite consensus disorder prediction 241 322 - -
Lan7g1246 465 SUPERFAMILY SAP domain 83 129 IPR036361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1246 Lan-Chr7 17296547 17299966 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan7g1246 SAP 2.8e-10 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1246 - - gmx:100815642 560.451