Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1232 ATGGTTCACCCAAAGAAATTCAGAGGTGTCAGGCAACGCCATTGGGGCTCATGGGTTGCTGAGATTCGCCATCCATTATTGAAAAGGAGGGTGTGGCTTGGGACATTTGAGACAGCAGAAGAAGCAGCTAGAGCATATGATGAAGCAGCAATTTTAATGAGTGGAAGAAATGCAAAAACAAATTTCCCAATTTCTGATAAACCAAATGAAACTCATCAAAAATCTTCTACAACTACTAGTTCCTCATCATCATCTTCATCTTCTTCTTCTAAATCATTATCTGAAATTCTAAGTGCAAAGCTTAGAAAATGTTGCAAATCACCATCACCTTCACTCACTTGCCTAAGGCTAGACAATGAAAATTCTCATATTGGTGTGTGGCAAAAAAGAGCAGGTTCTCATTCTGACTCAAATTGGATCATGATGGTTGAATTAGAAAGGAAAAATGTAACACTAGAAGCAGCAAATTCTGATGATTCAGAATTACAAGTTCAACAACCTCAAATGCAAGAGAAGGTAATAAAACCAGAGGAAAATAATAATAATAATAATAATACTAATAATAATAATAATAGTTGTTAA 582 0.3522 MVHPKKFRGVRQRHWGSWVAEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPISDKPNETHQKSSTTTSSSSSSSSSSSKSLSEILSAKLRKCCKSPSPSLTCLRLDNENSHIGVWQKRAGSHSDSNWIMMVELERKNVTLEAANSDDSELQVQQPQMQEKVIKPEENNNNNNNTNNNNNSC* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1232 193 MobiDBLite consensus disorder prediction 61 90 - -
Lan7g1232 193 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Lan7g1232 193 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 1 175 - -
Lan7g1232 193 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Lan7g1232 193 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Lan7g1232 193 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Lan7g1232 193 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Lan7g1232 193 MobiDBLite consensus disorder prediction 158 193 - -
Lan7g1232 193 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Lan7g1232 193 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Lan7g1232 193 SUPERFAMILY DNA-binding domain 6 65 IPR016177 GO:0003677
Lan7g1232 193 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1232 Lan-Chr7 17077245 17079474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1232 1 145 AP2-EREBP Transcription Factor Family AT1G15360 78.082 4.07e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan7g1232 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1232 - - gmx:100785898 222.246