Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1210 ATGGAAAATGATGCTAATTTCACCTTATCTTCCTCCTCCACTTCTTCTTCATCAACAACATCTTCTACCTCAAACTCATGCACCAAACAATACTCCAAAAAGGGTCCTCCAAATGATTCAACAAACCCTAAAAACTCACAAAATAGACCCAAGGAGTGCAAGAAGAGACAAAGGAGTGAGAATGAAGCAAAGAGCCCTAGTTATAGAGGTGTAAGAATGAGAAACTGGGGCAAATGGGTATCTGAAATCCGTGAACCTAAAAAGAAGACAAGAATATGGCTAGGAACATACCCTACAGCAGTAATGGCAGCTAGAGCACATGATGTTGCAGCTTTAGCTATCAAAGGCAATTCAGCTTTTCTCAATTTCCCTAACTTGGCACAAGAATTTCCAAGACCTGAAACCACATCTCCTAAGGATATTCAAGCTGCTGCTGCAAAAGCAGCTTTTACTATCTTTGAAGAGGATACTATGCATTGTGAAGATGACAATGATGCTGAAAATAAGTTAAACCAATTAGAAGAACATGTTACTTCTTCTTCAACTCTTTTCAGTGATAATTCTTTAGAGTCTTCAAGTTCTCCTTCTACTATAGATGATGACACATTGTTTGACCTGCCAGATCTTTTTCCTGATGGAAATAATGGACTTTTCTCATACTGTTCTACTTCTTGGCATTTATGTACTCTTGAGAATGGGTTAGAGGAGCAATTGTGGGAGAACTATTAG 729 0.3841 MENDANFTLSSSSTSSSSTTSSTSNSCTKQYSKKGPPNDSTNPKNSQNRPKECKKRQRSENEAKSPSYRGVRMRNWGKWVSEIREPKKKTRIWLGTYPTAVMAARAHDVAALAIKGNSAFLNFPNLAQEFPRPETTSPKDIQAAAAKAAFTIFEEDTMHCEDDNDAENKLNQLEEHVTSSSTLFSDNSLESSSSPSTIDDDTLFDLPDLFPDGNNGLFSYCSTSWHLCTLENGLEEQLWENY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1210 242 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Lan7g1210 242 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Lan7g1210 242 MobiDBLite consensus disorder prediction 1 47 - -
Lan7g1210 242 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Lan7g1210 242 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700|GO:0006355
Lan7g1210 242 SUPERFAMILY DNA-binding domain 67 125 IPR016177 GO:0003677
Lan7g1210 242 MobiDBLite consensus disorder prediction 1 69 - -
Lan7g1210 242 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Lan7g1210 242 PANTHER ETHYLENE RESPONSE FACTOR 8 242 - -
Lan7g1210 242 MobiDBLite consensus disorder prediction 48 67 - -
Lan7g1210 242 MobiDBLite consensus disorder prediction 177 197 - -
Lan7g1210 242 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Lan7g1210 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 242 - -
Lan7g1210 242 CDD AP2 66 126 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1210 Lan-Chr7 16270609 16271455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1210 55 236 AP2-EREBP Transcription Factor Family AT2G44940 49.524 1.72e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan7g1210 AP2 4.5e-13 CL0081