Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1198 ATGATGCTTCTTCAATCATCATGGCTTCTTTTGTGTCTTGTTTTTGTTTTAAACAGTTTTTTAACAATACCACCCTGCCATTGCCAGATTATTTCTCCTCAGAACATTGAAACCTTCTATCCTAATGAAACTTCTGCCTCAAAACCAACACCACAAAATCTTGCGCCACCACCACCAAGGCCTCAACCACAACCATCACCACAAGCACAAGAACTGGCACCAGGACCCGTAGCAGCATCGACAAGTACTTCATCGAAAGGTAAGATAGCGATTGCGGTAGCTGCAAGTGCAGCAAGTACAGTAGTTGTTTGTGGTATACTTTTCATTTTATATCAAAGGTGCTTAAGGAAAAGAAGGAGAATTGAGATGAAAAATACTAATATTGTGGTTCAAGGAAATGTGTTTGAGAGAATAGATGGAAATTTGAAGGGAATGATTGTGGATGAGGATGGTTTGGATGTAATTTATTGGAGAAAACTTGAAGGGAAAAACTCTAAAAGGGATCTTCATAAAGAGGTCTTTCATAGTCCTAAAAACAAAGAAAAAGAAGATGAAGAAAATGATCATGAAGAAAATCAAGTGACAAATTTCAAGTCCATCCAAGAAATTCCTCTACATAGAGGGAAATCTTCAACTTCTCACATAAAAGAGGATGAACCATATAGAATTACAAGAATTCCTCATAATGCTTCTTCTTCTTCTTCTTCTTCTTCTGCTTCCACTCCTCTTCCCACTTTTGTTGCATCAGATAAGAAACAAGAGTCTCCAATTCAACCTTACACTGCAACCCTTCAATCTTCACCATCACCAGCTTCAACTCTTCCACCTCTTCCACCTCCTCCACCAATAACAGCTACAAAGAGTCCATCTCCACCACCTCCTCCATCAAAGGAAGGTGGTAATTTGAAGTCATCATCAAAACCAGTACCTCCACCAATTAAACAAAGAAACTCTTCAGGGAAAGGTAGCATGTCAGAGACAAGAAATGATGAAGTCAAACTGAAGCCTTTGCATTGGGATAAGGTGAATACTAACAATGCTGATCACTCAATGGTTTGGGACAAAGTTGATGGTGGTTCTTTCAGTGTTGATCAAGATCTTATGGAAGCTCTCTTCGGTTATGTCGCCACCAATCGAAAATCCCCCAAAGGAAAGAATGATTCTATGAGTCCAAGCAAGGCTGGCATACCAACAGCGACACGAATTTTTCTTCTTGATCCCAGAAAATCACAGAACATTGCTATTGTTTTGAAATCTCTTGGAGCAACGCAAGATGAAATTCTTGAAGCACTCATTGATGGCAGAGGCCTTAATGCAGATACCATTGAAAAGCTTGCTAGAGTTTTTTCTCCAACACAAGAAGAACAATCTCTTATCCTTGAATACAAAGGAGACCCAACAAGACTAGCTACAGCTGAATCTTTCTTATATCACATCCTCAAATCTGTTCCTTCGGCATTTAAGCGCTTGAATGCCATGCTATTCAGGTTGAACTATGACTCCGAGATTCTCGATATCAGAGAATCTTTGCAGACACTTGAATTGGGATGTAAGGAGCTTAAAAGCCAGAGACTATTTGTGAGGCTTCTTGAAGCAGTGCTAAAGACAGGAAATCGTATCAACGCTGGTACTGCAAGAGGTAATGCTCATGCTTTCAATTTGGATTCTCTAAGGAAACTCTCTGATGTGAAGAGCACTAATGGAGAAACCACATTACTTAACTTTGTGGTCGAAGGAGTGATCCGTTTGGAAGGAAAACACATCGCTTTTAATCGCAGCCTTAGCCGAAGCAGCAGTAGAAACAGCAACAGCGATGTAAATGCAAACTCTAAGAACAATGCTACTCCTTCAAATGAAGATAAAGAAAGGGAATATACAATGCTAGGATTACCAATTGTTGGAGGGATCAGTTCTGAATTCTCTAACCTTAAGAAAGCAGCACTTATAGATTATGACAGTTTAGTCGGTTCAATCTCAGCCTTATCAACCCGGATAGTCGAAATTCAGAAACTTGTTTCCGAATGTGGAAATGAAGGAGGGAATTTTGTGAAAGAATTCAACCATTTAATTCGAGGCGCTAACGAAGAATTGAAATTAGTAAGAGATGAGCAAACAAGGGTAATGCAGCTTATCAAGAGAACAGCAGAATACTATCAAGGTGGAGCTTCAAAAGGAACTTCAGGACATAAGTTTCAATTATTTGTCATAGTCAAGGATTTTCTAGGAATGGTTGATCAAGCCTGCATAGAAATCGCGCGTAACTTGCAGAAGAAGAAAACACACAAGGCAAGTTCTGGCTAA 2301 0.3955 MMLLQSSWLLLCLVFVLNSFLTIPPCHCQIISPQNIETFYPNETSASKPTPQNLAPPPPRPQPQPSPQAQELAPGPVAASTSTSSKGKIAIAVAASAASTVVVCGILFILYQRCLRKRRRIEMKNTNIVVQGNVFERIDGNLKGMIVDEDGLDVIYWRKLEGKNSKRDLHKEVFHSPKNKEKEDEENDHEENQVTNFKSIQEIPLHRGKSSTSHIKEDEPYRITRIPHNASSSSSSSSASTPLPTFVASDKKQESPIQPYTATLQSSPSPASTLPPLPPPPPITATKSPSPPPPPSKEGGNLKSSSKPVPPPIKQRNSSGKGSMSETRNDEVKLKPLHWDKVNTNNADHSMVWDKVDGGSFSVDQDLMEALFGYVATNRKSPKGKNDSMSPSKAGIPTATRIFLLDPRKSQNIAIVLKSLGATQDEILEALIDGRGLNADTIEKLARVFSPTQEEQSLILEYKGDPTRLATAESFLYHILKSVPSAFKRLNAMLFRLNYDSEILDIRESLQTLELGCKELKSQRLFVRLLEAVLKTGNRINAGTARGNAHAFNLDSLRKLSDVKSTNGETTLLNFVVEGVIRLEGKHIAFNRSLSRSSSRNSNSDVNANSKNNATPSNEDKEREYTMLGLPIVGGISSEFSNLKKAALIDYDSLVGSISALSTRIVEIQKLVSECGNEGGNFVKEFNHLIRGANEELKLVRDEQTRVMQLIKRTAEYYQGGASKGTSGHKFQLFVIVKDFLGMVDQACIEIARNLQKKKTHKASSG* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1198 766 Pfam Formin Homology 2 Domain 326 744 IPR015425 -
Lan7g1198 766 MobiDBLite consensus disorder prediction 41 80 - -
Lan7g1198 766 SMART it6_source 324 759 IPR015425 -
Lan7g1198 766 PANTHER FORMIN-LIKE PROTEIN 2 763 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 271 298 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 168 337 - -
Lan7g1198 766 Gene3D Formin, FH2 domain 343 765 IPR042201 -
Lan7g1198 766 PANTHER FORMIN-RELATED 2 763 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lan7g1198 766 MobiDBLite consensus disorder prediction 209 224 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 168 195 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 299 325 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 51 70 - -
Lan7g1198 766 Coils Coil 683 703 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 594 615 - -
Lan7g1198 766 SUPERFAMILY Formin homology 2 domain (FH2 domain) 337 761 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 226 270 - -
Lan7g1198 766 MobiDBLite consensus disorder prediction 594 622 - -
Lan7g1198 766 ProSiteProfiles Formin homology-2 (FH2) domain profile. 324 766 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1198 Lan-Chr7 15449579 15452715 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1198 8 760 FH2 protein (formin) Gene Family AT1G70140 44.005 0.0 535