Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1197 ATGGATCATGTAGCAGCACAAGGTCGTCCTCTCCCATCTTTTCTCACTAGAGATCTTCAATTAAACCCTTTCCACCAATTCCAACCCCATCACCAAGATAACAACACTGATGAAGATAATAACAATAGCAAGCACAACAACAACGACAACTTCTTAAACCGCAGCCTAAATCGTGGTCCAAATGAAAACACCACCACAAACAACAACGCCGCCACTTCTGCCACGGCGGACGGCAAAGAATTGAGCTCAACCATGAGTCCAGGAGATGGTGAGATGGGTACAATAAGAAGATCTAGAGGAAGACCAGCAGGGTCCAAGAACAAACCTCAGCAACCCATCATCATCAACAAAGACAGCGCCAACGCTCTCCGGTCACACGTCATCGAAATCAGCGACGGCTGCGACGTCATGGAAGGTGTTACCGCCTATGCACGGCGGAGGCAGCGTGGGGTTTGCATCCTAAGCGGAAGCGGTGCTGTCACCAACGTCACCCTAAAGCAGCCGGCATCTGCCGGCGCGGTGGTGACACTACATGGAAGATTCGAGATCTTGTCATTGTCTGGCTCCTTCCTGCCGCCGCCCGCACCACCGGCGGCCTCCAGGCTGGCTATATATCTTGCTGGTTCACAAGGTCAGGTGGTTGGCGGCTGTGTGGTGGGGCCCCTCTTGGCTTCTGGTCCACTGGTGATCATGGCGGCGTCGTTCGGTAATGCGACGTATGAGCGGCTACCGTTGGAGGAGGAGGGGAGTTCTCCGGTCGCCGGTGGTGGAGGGTTAGGGTTAGGATCTTCTGGAATGGTGCAACAAGAACATCAACAGCAACATCTTGAAGCAGATCATAACACATTTTCGGTGTATAATGGGGTATCACATAATCTTCTCAATTCATTTGAGTTACCTGCATCTAATGGTGCAGCTGAAGCAGGTTTCTGGGGTGGCAATGGAAGTGGTCGCTCTTCTTTTTAA 966 0.5186 MDHVAAQGRPLPSFLTRDLQLNPFHQFQPHHQDNNTDEDNNNSKHNNNDNFLNRSLNRGPNENTTTNNNAATSATADGKELSSTMSPGDGEMGTIRRSRGRPAGSKNKPQQPIIINKDSANALRSHVIEISDGCDVMEGVTAYARRRQRGVCILSGSGAVTNVTLKQPASAGAVVTLHGRFEILSLSGSFLPPPAPPAASRLAIYLAGSQGQVVGGCVVGPLLASGPLVIMAASFGNATYERLPLEEEGSSPVAGGGGLGLGSSGMVQQEHQQQHLEADHNTFSVYNGVSHNLLNSFELPASNGAAEAGFWGGNGSGRSSF* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1197 321 MobiDBLite consensus disorder prediction 247 268 - -
Lan7g1197 321 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 236 IPR005175 -
Lan7g1197 321 ProSiteProfiles PPC domain profile profile. 120 256 IPR005175 -
Lan7g1197 321 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 313 IPR014476 GO:0003680
Lan7g1197 321 MobiDBLite consensus disorder prediction 26 112 - -
Lan7g1197 321 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 313 - -
Lan7g1197 321 MobiDBLite consensus disorder prediction 45 82 - -
Lan7g1197 321 CDD DUF296 124 191 IPR005175 -
Lan7g1197 321 PIRSF ESCAROLA 19 321 IPR014476 GO:0003680
Lan7g1197 321 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 250 - -
Lan7g1197 321 Gene3D - 123 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1197 Lan-Chr7 15433357 15434887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1197 12 321 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 50.926 5.09e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1197 - - lang:109359498 386.726