Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1194 ATGGAGGCCATTGGTTTTGTGGATGACCTATTAGATTTCTCATTAGGCATGGGTGAAGAAGATGATGATGAGGACAAAAACCGGAAAGCCTTTCTTGAACTTAACCCAAAATGCAGTGATCCAGCATCCTTATGCCCATTGGACATGGGTGACCCTAGCCCTCCATTTTCTGAGTTTGCAGAAGAAGAGCTTGAATGGCTATCGAACAAAGATGCATTTCCTGCTGTTGAAACATTTGTTGACATAACCTCTATTCAACCCAACTTATCAAAGCACCAGACAGGTTCAATGCTTGAACACAGCACAAGCAGTAGCAACAGTAATAACAGCACTAACAGCATTAGCCTTTTAGCCGGCTATGATAACCTGAAGGTCCCTGTCCGTGCACGGAGCAAGTCTCGCAGTAGGCGTCTCCCTGGCAATTCTGGCATCTCTGCCCAGCATTCCTGGACAAGACAGCCAAGCAAGGAAAATGCCAAAGCAGAAGTGATAACAATCCCAACCATTGGGAGGAAATGTCTGCACTGTGGAGCTGAAAAAACTCCGCAATGGCGTGCAGGCCCCCTTGGGCCAAAAACACTTTGTAATGCATGCGGGGTAAGGTTTAAGTCTGGGCGTCTCGTGCCTGAGTACCGCCCTGCAAGTAGCCCATCTTTTCGTAGTGACTTGCATTCAAATTCCCATAGGAAGGTAATGGAGATGAGGAAGCAGAAGCAAATTGGAATGGTTTGA 732 0.4686 MEAIGFVDDLLDFSLGMGEEDDDEDKNRKAFLELNPKCSDPASLCPLDMGDPSPPFSEFAEEELEWLSNKDAFPAVETFVDITSIQPNLSKHQTGSMLEHSTSSSNSNNSTNSISLLAGYDNLKVPVRARSKSRSRRLPGNSGISAQHSWTRQPSKENAKAEVITIPTIGRKCLHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPSFRSDLHSNSHRKVMEMRKQKQIGMV* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1194 243 MobiDBLite consensus disorder prediction 91 110 - -
Lan7g1194 243 MobiDBLite consensus disorder prediction 129 159 - -
Lan7g1194 243 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 169 231 - -
Lan7g1194 243 ProSitePatterns GATA-type zinc finger domain. 173 198 IPR000679 GO:0006355|GO:0043565
Lan7g1194 243 MobiDBLite consensus disorder prediction 136 158 - -
Lan7g1194 243 ProSiteProfiles GATA-type zinc finger domain profile. 167 203 IPR000679 GO:0006355|GO:0043565
Lan7g1194 243 PANTHER GATA TRANSCRIPTION FACTOR 7 239 - -
Lan7g1194 243 SMART GATA_3 167 217 IPR000679 GO:0006355|GO:0043565
Lan7g1194 243 Gene3D - 168 220 IPR013088 GO:0006355|GO:0008270
Lan7g1194 243 CDD ZnF_GATA 172 220 IPR000679 GO:0006355|GO:0043565
Lan7g1194 243 Pfam GATA zinc finger 173 206 IPR000679 GO:0006355|GO:0043565
Lan7g1194 243 PANTHER GATA TRANSCRIPTION FACTOR 1 7 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1194 Lan-Chr7 15146873 15150361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1194 61 241 C2C2-Gata Transcription Factor Family AT3G24050 45.755 1.15e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan7g1194 GATA 7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1194 - - ahf:112789633 317.39