Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1181 ATGTCTCTTCCAGTTTGCTCGCCGGAGCAACTAGCTCAGTTCCTGGGCCCCAACACAACAAACGCCGCCGACGCCGCCAACTTCATCTGCAACCAGTTCACCGCCGTCAATAACAAGTTCATCGACACTACCTTCGCCGTGGATAACACATACCTCTTATTCTCTGCCTATCTTGTTTTCTCCATGCAGCTCGGTTTCGCTATGCTCTGCGCCGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTGCTTGACGCCGCCGCCGGTGGCTTGTTTTACTATCTCTTTGGTTTTGCCTTTGCCTTTGGATCCCCGTCCAACGGCTTCATTGGCCGCCATTTTTTCGGCCTCAAGGATGTTCCAGATGCAGCATTTGATTACAGTTATTTTCTCTATCAATGGGCCTTCGCCATCGCCGCCGCCGGCATAACCAGCGGCTCCATCGCTGAGAGGACTCAATTCGTGGCTTATCTCATATATTCATCTTTCCTCACCGGCTTTGTTTACCCTGTGGTATCACACTGGTTTTGGGCTGTTGATGGCTGGGCCAGCCCCAATAACACGGGCAACCTTCTTTTTGGCACCGGTGTCATTGACTTTGCTGGCTCAGGTGTTGTCCACATGGTGGGTGGCATTGCAGGCCTCTGGGGCGCTCTAATTGAGGGCCCCAGGATAGGCCGATTCGACCATACTGGTCGAGCCATCGCACTACGTGGACATAGTGCCACGTTAGTTGTGCTTGGTACTTTTATGCTTTGGTTCGGTTGGTATGGATTTAATCCGGGCTCGTTTACCAAGATTTTAGGTGTTTATGAATCTGGTAACTATTATGGTCAATGGAGTGCTATTGGTAGGACCGCTGTCACAACCACATTAGCTGGTTGTACAGCAGCCCTAACAACACTTTTTGGGAAAAGAATTCTCTCGGGTCATTGGAATGTGACCGATGTGTGCAACGGCCTGCTCGGTGGGTTCGCAGCTATCACGGCTGGATGCTCTGTCGTAGAGCCCTGGGCCGCGATAGTATGCGGATTCATAGCAGCATTAGTTTTAATTGGGTTCAACAAATTAGCCGAGAAGGTGAGTTACGACGACCCATTGGAGGCGGCGCAACTTCACGGCGGTTGCGGTGCGTGGGGAATTATTTTCACGGCCTTATTTGCTAAAAAGGAGTATGTGAACCAAGTTTATCCGGGTAAACCGGGTCGATCATATGGGTTATTAATGGGTGGTGGAGGAAAGTTGTTAGGGGCACATGTAATACAAATATTGGTTATTATTGGTTGGGTTAGTGCCACAATGGGTCCACTTTTCTTTGTTCTTAATAAGATGAAATTGCTTAGAATCTCTACAGAGGATGAACTTGCAGGAATGGATCTTACTAGACATGGTGGGTTTGCTTATGCATATGAGGATGAGTCACATAGACATGGTATTCAATTGAGAAAGATTGAACCCAATGATTCTTCTTCCACTCCCACCACATAA 1500 0.49 MSLPVCSPEQLAQFLGPNTTNAADAANFICNQFTAVNNKFIDTTFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGRHFFGLKDVPDAAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWAVDGWASPNNTGNLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGRAIALRGHSATLVVLGTFMLWFGWYGFNPGSFTKILGVYESGNYYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFIAALVLIGFNKLAEKVSYDDPLEAAQLHGGCGAWGIIFTALFAKKEYVNQVYPGKPGRSYGLLMGGGGKLLGAHVIQILVIIGWVSATMGPLFFVLNKMKLLRISTEDELAGMDLTRHGGFAYAYEDESHRHGIQLRKIEPNDSSSTPTT* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1181 499 TIGRFAM amt: ammonium transporter 48 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lan7g1181 499 Pfam Ammonium Transporter Family 51 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lan7g1181 499 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 493 - -
Lan7g1181 499 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lan7g1181 499 SUPERFAMILY Ammonium transporter 47 453 - -
Lan7g1181 499 Gene3D Ammonium transporter AmtB like domains 26 491 IPR029020 -
Lan7g1181 499 PANTHER AMMONIUM TRANSPORTER 5 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1181 Lan-Chr7 14707878 14709670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1181 6 498 Inorganic Solute Cotransporters AT4G13510 81.836 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1181 K03320 - egt:105950262 846.654