Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1180 ATGTATTGGGAGGGAGTTATGGTTAACCATATGGGTTGGAGTGTCCTAGAGGAAGATGTTTGGAGGAAGGGACCTTGGACTGCTGAGGAGGACAGGTTACTTGTTGACTATGTCAGGCTGCATGGTGAAGGCAGATGGAACTCTGTTGCTAGGCTAGCAGGATTGAAAAGAAATGGCAAAAGCTGCAGATTGAGATGGGTGAATTATCTGAGACCAGATCTTAAGAGGGGTCAGATAACATCACAAGAAGAGAGCATAATTGTAGAATTGCACAATAAGTGGGGAAACAGGTGGTCGACAATTGCAAGAAGCTTGCCAGGAAGAACTGACAATGAGATAAAGAATTATTGGAGGACTCATCTCAAGAAAAAGGTAAAAAGACCCTTTGATGCTGCAGAAAAGGCAAAAAATAACCTTATGAGGAAGCATAAATTTCACCAACAACAACAACAGTTACAACAACATCAGCAGGTGCAACAGCAACAACAATTGCAATTCAACTTGGACATGAAAGGGGTCATGGCCTTGCTTGAGGAAAATAGCCATAGAGTACCTTATATGCCACAAATGAGACAAGAAATGGTCAAAGTGTACCCAAACACCACAGAAGAGCAGGGATATTTCTACTCTATGCTCAATGGCAATAATAATGCATCTGCACCAGAGGTCTCAAATGAAGAAGTTTCTTGGGGTGGACTGTGGAATATGGACAATGTTCATGGCAATTTCAGTTTTGCTAGTGCAACAAACAAAGTCAGTCTACAAAGTCTAGTTGCTCCTTTCTGTTAA 789 0.417 MYWEGVMVNHMGWSVLEEDVWRKGPWTAEEDRLLVDYVRLHGEGRWNSVARLAGLKRNGKSCRLRWVNYLRPDLKRGQITSQEESIIVELHNKWGNRWSTIARSLPGRTDNEIKNYWRTHLKKKVKRPFDAAEKAKNNLMRKHKFHQQQQQLQQHQQVQQQQQLQFNLDMKGVMALLEENSHRVPYMPQMRQEMVKVYPNTTEEQGYFYSMLNGNNNASAPEVSNEEVSWGGLWNMDNVHGNFSFASATNKVSLQSLVAPFC* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1180 262 SUPERFAMILY Homeodomain-like 22 117 IPR009057 -
Lan7g1180 262 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Lan7g1180 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Lan7g1180 262 ProSiteProfiles Myb-like domain profile. 22 70 IPR001005 -
Lan7g1180 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 70 IPR017930 -
Lan7g1180 262 CDD SANT 80 121 IPR001005 -
Lan7g1180 262 Gene3D - 80 125 - -
Lan7g1180 262 SMART sant 75 123 IPR001005 -
Lan7g1180 262 SMART sant 22 72 IPR001005 -
Lan7g1180 262 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Lan7g1180 262 Pfam Myb-like DNA-binding domain 76 121 IPR001005 -
Lan7g1180 262 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 253 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lan7g1180 262 CDD SANT 25 70 IPR001005 -
Lan7g1180 262 Gene3D - 23 75 - -
Lan7g1180 262 PANTHER MYB TRANSCRIPTION FACTOR 4 253 - -
Lan7g1180 262 Coils Coil 129 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1180 Lan-Chr7 14684279 14685836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1180 18 262 MYB Transcription Factor Family AT3G24310 55.094 5.59e-82 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan7g1180 Myb_DNA-binding 1.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1180 K09422 - gmx:100795981 407.527