Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1170 ATGGCAACCGAAGAAGTAGCAGCAGTTGAAGTTGTGGCGGTTCCCGCGGCGGTGCCGGAGTCGGAGACTGGTTCCATAAACAAACTAGAGAGGCAATGGACTTTCTGGTTAGATAATCAATCGAAACCTAAGCAAGGTGCTGCTTGGGGATCCTCTCTTCGCAAGGTCTATACCTTCGACACCGTTCAAGAATTCTGGTCTTTATATGATCAGATATTCAAGCCTAGCAAGTTGACTGGAAATGCAGACTTCCATTTGTTCAAGACTGGGATTGAACCAAAATGGGAAGATCCTGAGTGTGCCAATGGAGGAAAGTGGACTGTTTCTAGCAACAGAAAGACTAACCTCGATACCATGTGGCTTGAAACTCTCATGGCTTTGATTGGGGAGCAATTCGATGACGCTGAGGACATATGTGGTGTGGTTGCAAGTGTTCGCCATAGGCAGGACAAGATTTCCTTATGGACAAAAACAGCTGCAAATGAGGCTGCCCAGATGAGCATTGGAAGGAAGTGGAAGGATATCATTGATGTTACAGACAAGATAACATATAGCTTCCATGATGATGCTAGGAGGGAAAGATCATCAAAGGGTAGATACAATGTATAA 609 0.4516 MATEEVAAVEVVAVPAAVPESETGSINKLERQWTFWLDNQSKPKQGAAWGSSLRKVYTFDTVQEFWSLYDQIFKPSKLTGNADFHLFKTGIEPKWEDPECANGGKWTVSSNRKTNLDTMWLETLMALIGEQFDDAEDICGVVASVRHRQDKISLWTKTAANEAAQMSIGRKWKDIIDVTDKITYSFHDDARRERSSKGRYNV* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1170 202 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 196 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan7g1170 202 Pfam Eukaryotic initiation factor 4E 28 183 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lan7g1170 202 SUPERFAMILY eIF4e-like 25 196 IPR023398 -
Lan7g1170 202 ProSitePatterns Eukaryotic initiation factor 4E signature. 83 106 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lan7g1170 202 Gene3D RNA Cap, Translation Initiation Factor Eif4e 20 202 IPR023398 -
Lan7g1170 202 PANTHER BNAA08G29940D PROTEIN 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1170 Lan-Chr7 14477052 14480655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1170 1 194 Eukaryotic Initiation Factors Gene Family AT5G35620 64.322 1.08e-88 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1170 K03259 - sind:105158602 334.724