Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1162 ATGGAATGGAGCACTGTTCGTTCAGGACAGATAGAACAACCCCTTTGTTTGACTTTACTCATATCTTTAAATTGGAGAAGACAAAATAAATTCAAAACCATCTTCAAATTCTATGGCCAAAGATATAAAGAACCTAGCTATCTGAGTCATCAATTACGTTCTTGTAAATCCAAATTCAGAGTTTCACACCTTAGTTTAAAATCCTTCTTTTTTCTTCCTTTTTTTCACCTTCAACAAATAAAGCTAATAGCAACACTGGCTAATCCTTGGTGGACCGGTCAGGTGGGGTTACCCGGAGTAGACCCTTCACATGGCATGAACAAACGCCACCACATGGACCTTTCCATCAACGAAAGCAGCAGCAGAAGCGGCGGCGGTGGCGGTAGAGATGAAGATGAAGAAAAAGACAACGGTGATGAGCCAAAGGAGGGTGCAGTTGAGATTGGAAACCGCAGACCAAGAGGAAGACCACCTGGTTCAAAGAACAAACCAAAACCACCAATCTTTGTGACTAGGGATAGCCCAAATACTCTAAGAAGCCATGTGTTGGAAGTTGCTGGTGGAGCTGATGTAGCAGAAAGTGTTGCACAATTTGCAAGAAGGCGCCAACGTGGTGTATGTGTTCTTAGTGGAAGTGGGTCTGTGGCAAACGTTACTCTTAGGCAACCAGCTGCACCAGGAGCAGTTGTGGCACTTCATGGAAGATTTGATATTTTGTCCTTAACTGGGGCATTCTTGCCTGGTCCTGCTCCTCCTGGAGCCACAGGGCTTACAGTGTACCTTGCTGGAGGGCAAGGACAAGTTGTTGGAGGGAGTGTTGTTGGGTCTTTAGTAGCTGCTGGACCAGTCATGTTGATTGCTGCAACTTTTGCTAATGCAACCTATGAGAAATTGCCCCTTGAGGATGATGATGAGGGTGGTGGAGGTGGTGGTGGTGGTAATAGTGGTGTGCAAGGTGGAGGTAGAGGTGTTGGAGGGTCTCCTCCTCCTGGGATTGGAAACAGTGGTGGGGCTCATCAATTGCAGGGTGGGATTCCAGATCCATCTTCTCTTCCTTTGTATAATCTGACATCAAATTTGATTCCTAATGGAGGCCAAGTGGGTCATGAAGCTTTTGCTTGGGCTCATGGAAGGCCACCTTACTGA 1146 0.4625 MEWSTVRSGQIEQPLCLTLLISLNWRRQNKFKTIFKFYGQRYKEPSYLSHQLRSCKSKFRVSHLSLKSFFFLPFFHLQQIKLIATLANPWWTGQVGLPGVDPSHGMNKRHHMDLSINESSSRSGGGGGRDEDEEKDNGDEPKEGAVEIGNRRPRGRPPGSKNKPKPPIFVTRDSPNTLRSHVLEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFDILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMLIAATFANATYEKLPLEDDDEGGGGGGGGNSGVQGGGRGVGGSPPPGIGNSGGAHQLQGGIPDPSSLPLYNLTSNLIPNGGQVGHEAFAWAHGRPPY* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1162 381 CDD DUF296 179 262 IPR005175 -
Lan7g1162 381 SUPERFAMILY AF0104/ALDC/Ptd012-like 176 302 - -
Lan7g1162 381 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 114 381 - -
Lan7g1162 381 MobiDBLite consensus disorder prediction 115 175 - -
Lan7g1162 381 Pfam Plants and Prokaryotes Conserved (PCC) domain 179 291 IPR005175 -
Lan7g1162 381 ProSiteProfiles PPC domain profile profile. 175 314 IPR005175 -
Lan7g1162 381 MobiDBLite consensus disorder prediction 301 346 - -
Lan7g1162 381 Gene3D - 178 305 - -
Lan7g1162 381 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 114 381 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1162 Lan-Chr7 14031926 14033795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1162 86 381 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 59.136 2.07e-100 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1162 - - mesc:110601522 374.785