Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1157 ATGGATCATGTAATTAATGGAAAATTCAAGCTTGGGAGGAAGATTGGGAGTGGATCTTTTGGGGAACTTTATTTGGGTGTTAATGTTCAAAGTGGAGAGGAAGTGGCTGTTAAGTTGGAACCTGTGAAAACAAAGCATCCTCAACTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACTGGCATACCTCATTTAAAATGGTTTGGAGTTGAGGGTGACTACAATGTCATGGTCATTGACCTTCTTGGGCCAAGTCTTGAAGACTTGTTCAACTATTGCAGTCGGAAGTTCTCTCTGAAAACAGTTCTGATGCTTGCGGACCAAATGATAAACAGAGTTGAGTACATGCACTCGCGGGGACTTCTGCATCGTGATATAAAGCCCGACAACTTTTTAATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATAATTGATTATGGCCTTGCAAAAAAGTATCGCGACCTTCAAACACATAAACATATACCATACAGGGAAAACAAGAATCTCACTGGAACTGCTCGGTATGCTAGTGTTAACACTCACCTTGGAATTGAACAAAGCAGAAGAGATGATCTTGAATCGCTTGGTTACGTGTTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAAAAGTATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTCTTATGCAAGTCACATCCATCAGAATTCACATCATACTTTCACTATTGTCGTTCATTGCGGTTTGAAGATAAACCTGATTATTCATATCTTAAGAGACTCTTTCGAGATCTATTCATTAGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCAAGTTCTATAGTTCAACCAAGTGGGAAACCTGTCTTAAATCCAGGACCATCTGGGGAGAGATCAGAACGGATTTCAGTTGGAAAAGAGATTCGGGATAGATTATCAGGTGCAGTCAAGGTATTTTCAAGAAGGAATAGCTCTGGGCGTGGTCCAAGTACTGATCGTTCTAGGCATAGGGCTTCAGATGATGTGCCATCTTCCAAAGATGTGCAACCTGATATTGAGAGAGCTCATAGTTCTTCTCAGAACAGCAGTGCATTAAAAAGGCCTGTCATTTCAAGCAGCCGACTAAGCTCCTCTGGTGAGCCTAGTGAAAATCATTCGAGCCGATTGGTCTCAAACAGTGGTCGCATATCTACTACTACTCGGAGGATTCAACCAAGTTTTGAGTCCAAATCATCTTTCACCCGCATTGCAGGGACACAAGGTGGCCGTCATGATGCACTCCGGAGTTTTGAGCTCTTATCAATTGCTTCAGGGAAAAAGAAATGA 1392 0.4131 MDHVINGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCSRKFSLKTVLMLADQMINRVEYMHSRGLLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVFMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSHPSEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSIVQPSGKPVLNPGPSGERSERISVGKEIRDRLSGAVKVFSRRNSSGRGPSTDRSRHRASDDVPSSKDVQPDIERAHSSSQNSSALKRPVISSSRLSSSGEPSENHSSRLVSNSGRISTTTRRIQPSFESKSSFTRIAGTQGGRHDALRSFELLSIASGKKK* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1157 463 Gene3D Transferase(Phosphotransferase) domain 1 1 324 - -
Lan7g1157 463 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1157 463 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1157 463 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lan7g1157 463 MobiDBLite consensus disorder prediction 376 440 - -
Lan7g1157 463 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Lan7g1157 463 MobiDBLite consensus disorder prediction 304 447 - -
Lan7g1157 463 MobiDBLite consensus disorder prediction 322 338 - -
Lan7g1157 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lan7g1157 463 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 449 - -
Lan7g1157 463 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1157 463 MobiDBLite consensus disorder prediction 350 375 - -
Lan7g1157 463 CDD STKc_CK1_delta_epsilon 8 282 - -
Lan7g1157 463 PANTHER CASEIN KINASE-RELATED 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1157 Lan-Chr7 13900475 13906135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1157 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 3.87e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lan7g1157 Pkinase 9.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1157 K08960 - mnt:21404312 806.594