Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1156 ATGGAAGGTACAAGGCGCTGGTTTAGTAAGTTCAAGCCGAAGGACAAAACGAAGCCTGCAAATGACAAGGAAACTAATGGCACAAAAAAAGAAGGATCCAAAACCCCGACAAATGACGAAGCACCTTCAAATGTAACAAAACAGAAAGTTGAAGCTGCAAAGCAGTACATAGAAAACCACTATAAGAAACAGATGCAGAGCCTTCAGGAGCGGAAGGAAAGACGTAATATGCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCTGCGGAAGAGCAGAACAACTTGCTTAAGTATTTGGAGAAAAAGGAGACAGAATACATGCGCCTAATGAGACACAAGATGGGGGCTGATGATTTCGAACCCCTCACTATGATCGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGGGAGAAGGCAAATGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCAGAGGCCAAGTTGAACATGTAAAAGCTGAGAGGAATCTACTTGCTGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAAGAGTATTTATATCTCATCATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAGGACATACTAACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTGCTAGCCATAGAGTCGATTCATAAGCACAATTATATTCATAGGGATATCAAGCCTGACAACTTGCTCTTAGATAGACATGGTCACATGAAATTATCAGATTTTGGGTTGTGCAAACCGCTGGACTGCAGTACTCTTCAGGAAAAGGACTTCTCTACTGGAACTAACAGAAGTGGAGCCCTTCGGAGTGATGGACGTCCGGTGGCTCCTACACGAACGCAACAAGAACAGCTGCAACATTGGCAGAAAAATAGGCGAATGCTTGCTTATTCTACAGTTGGAACACCTGATTATATTGCACCTGAAGTTCTACTGAAGAAAGGATATGGCGTAGAATGCGATTGGTGGTCTCTGGGAGCTATAATGTATGAAATGCTTGTAGGTTTTCCACCATTTTATTCAGATGAACCAATGTCAACTTGTAAAAAGATAGTAAATTGGAAAACGTATTTAAAATTTCCAGAAGAAGCTAAACTATCAGCAGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTAGAACAGAGGCTTGGAACCAAAGGAGCTCATGAAATAAAGGCTCACCCATGGTTCAAAGGTACTGAATGGGATAAATTGTACCAAATGAAGGCTGCTTTTATTCCTGAGGTCAATGATGAATTAGATACCCAAAATTTTGAGAAGTTTGATGAGGTGGACAAGAAAACTGAACCATCCTCAAAGGCAGGCCCATGGAAAAAGATGCTGCCATCTAAGGATGTTAACTTTGTTGGGTACACATACAAGAATTTTGAAATTTTGAATGATCATGAAATACATGGAATCACTGAATTGAAGAAAAAGAGCACGAAACCTAAAAGGCCATCTATCAGGGCCCTATTTGATGATGAATCAGCTATGGCTTCCAATCAACAAGCCAAAGGGAGCTTCATAAACCTCTTACCTACTCAAATAGAAGAAGTTCATGAGAAGAGTGAATCACACTGA 1647 0.4092 MEGTRRWFSKFKPKDKTKPANDKETNGTKKEGSKTPTNDEAPSNVTKQKVEAAKQYIENHYKKQMQSLQERKERRNMLEKKLADAEVSAEEQNNLLKYLEKKETEYMRLMRHKMGADDFEPLTMIGKGAFGEVRVCREKANGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRHGHMKLSDFGLCKPLDCSTLQEKDFSTGTNRSGALRSDGRPVAPTRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGFPPFYSDEPMSTCKKIVNWKTYLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGAHEIKAHPWFKGTEWDKLYQMKAAFIPEVNDELDTQNFEKFDEVDKKTEPSSKAGPWKKMLPSKDVNFVGYTYKNFEILNDHEIHGITELKKKSTKPKRPSIRALFDDESAMASNQQAKGSFINLLPTQIEEVHEKSESH* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1156 548 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Lan7g1156 548 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Lan7g1156 548 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1156 548 Coils Coil 61 102 - -
Lan7g1156 548 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 21 521 - -
Lan7g1156 548 SUPERFAMILY Protein kinase-like (PK-like) 93 456 IPR011009 -
Lan7g1156 548 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Lan7g1156 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Lan7g1156 548 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1156 548 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lan7g1156 548 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan7g1156 548 MobiDBLite consensus disorder prediction 1 36 - -
Lan7g1156 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 521 - -
Lan7g1156 548 Gene3D Transferase(Phosphotransferase) domain 1 203 281 - -
Lan7g1156 548 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Lan7g1156 548 CDD STKc_NDR_like 117 482 - -
Lan7g1156 548 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1156 548 MobiDBLite consensus disorder prediction 1 49 - -
Lan7g1156 548 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1156 Lan-Chr7 13876557 13885815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1156 1 539 AGC Kinase Gene Family AT3G23310 81.181 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lan7g1156 Pkinase 2.3e-64 CL0016