Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1151 ATGGATTGTTCCTCCATCCACCACTCATCAAACTCCGATTTTTCCTCAGAATCTTCATTAGGGTCACCAGATTTAATCTCACTGAATCTCAACAATGATCACTTCCTTCCCTTCAATGAGAATGACCCAGATGAGATGCTTCTCTATGGCATGATCACCTCCCAACAACAACTACAACCATTTGGCACATGCATAGTGAACAAGGAAGATGAGGTGAGTTCAAAGGAGAAAAACAATAGTGGTGGTGACAACAACAGTAGAATGAATAAGGAGAAGGCCTACCGCGGTGTCCGGCGGCGGCCGTGGGGGAAGTTTGCGGCTGAGATAAGGGATTCCACAAGGCATGGGATTAGGGTTTGGCTGGGAACATTTGATAGTGCAGAAGCAGCAGCACTAGCTTATGATCAAGCTGCTTTTTCCATGAGGGGTTCTGCAGCAATACTCAATTTCTCTGTTGAAAGGGTGAAGGAATCACTTAGGGAAATCATGAACTATAATTGTGAAGATTATGATGATGATGATGAGTGTTCTCCTGTGGTTGCTTTGAAGAAAAAACACTCCATGAGAAAGAAAATGGGAATAAAGAAGAAAGAGACAAGTGTTAGGAATAGGATAGACAATGTGGTTGTCTTTGAAGATTTAGGTCCAGAATATTTGGAACAATTATTAATGTCCTCTGAGAATCCTAGTAATTGGTGA 699 0.4206 MDCSSIHHSSNSDFSSESSLGSPDLISLNLNNDHFLPFNENDPDEMLLYGMITSQQQLQPFGTCIVNKEDEVSSKEKNNSGGDNNSRMNKEKAYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFSVERVKESLREIMNYNCEDYDDDDECSPVVALKKKHSMRKKMGIKKKETSVRNRIDNVVVFEDLGPEYLEQLLMSSENPSNW* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1151 232 MobiDBLite consensus disorder prediction 69 93 - -
Lan7g1151 232 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Lan7g1151 232 MobiDBLite consensus disorder prediction 1 20 - -
Lan7g1151 232 PANTHER DNA-BINDING DOMAIN 26 225 IPR044808 GO:0003700|GO:0009873
Lan7g1151 232 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Lan7g1151 232 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Lan7g1151 232 SUPERFAMILY DNA-binding domain 93 152 IPR016177 GO:0003677
Lan7g1151 232 CDD AP2 94 150 IPR001471 GO:0003700|GO:0006355
Lan7g1151 232 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
Lan7g1151 232 Gene3D AP2/ERF domain 92 153 IPR036955 GO:0003700|GO:0006355
Lan7g1151 232 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Lan7g1151 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 26 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1151 Lan-Chr7 13691699 13692660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1151 36 232 AP2-EREBP Transcription Factor Family AT3G23240 60.199 9.60e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan7g1151 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1151 K14516 - jre:109007057 233.802