Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1150 ATGGATTCCTTAGAAAACAGCGCCTCTTGGGATGATTTTCTTCATTTCATCGATCCTAATCCCTCTTCACCCACTGATTTCCTTCTCTCAAATCCAAGTGTGAGCACGGAAATTGACTTTTCGGGTGGTGCTGTTGCCTGTCAAGAGAGCTCCAGGAAGAGGTTACGGGCTGATTCATGCCCCAGGGCAGGTGCAAAAGCTTGCCGGGAGAAATTGCGGAGGGAGAAATTCAATGAAAGGTTTTGTGACTTGAGCTCTGTTTTGGAAACTGGGAGACCTGTGAAAACGGATAAACCAGCTATACTTGATGACGCTATCAGAGTCTTGACCCAACTTAAAACTGAAGCTCAGGAACTCAAAGAAACACATGAAAAATTATTAGAGGAAATAAAATGTTTAAAGGCAGAGAAAAAGGAACTCCGCGAAGAGAAACTTGTTCTGAAAGCAGATAAAGAAAAGATTGAGAAGCACTTGAAAGGTTTCTCCATTCCACATGCAGGGTTTATGCCGCCGCCACCTCATGTAGCTGCATATCAAGGAGGTATGAACAAGATGGCTGTTTATCCAAACTATGGTTATATCCCAATGTGGCAATATCTTCCTCTCTCTACCAGAGATACATCTCATGATCATGAACTTAGGCCTCCTGCTGCATAG 657 0.4353 MDSLENSASWDDFLHFIDPNPSSPTDFLLSNPSVSTEIDFSGGAVACQESSRKRLRADSCPRAGAKACREKLRREKFNERFCDLSSVLETGRPVKTDKPAILDDAIRVLTQLKTEAQELKETHEKLLEEIKCLKAEKKELREEKLVLKADKEKIEKHLKGFSIPHAGFMPPPPHVAAYQGGMNKMAVYPNYGYIPMWQYLPLSTRDTSHDHELRPPAA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1150 218 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 112 IPR011598 GO:0046983
Lan7g1150 218 SMART finulus 67 118 IPR011598 GO:0046983
Lan7g1150 218 CDD bHLH_AtILR3_like 66 141 - -
Lan7g1150 218 Pfam Helix-loop-helix DNA-binding domain 64 112 IPR011598 GO:0046983
Lan7g1150 218 PANTHER TRANSCRIPTION FACTOR BHLH104 1 218 - -
Lan7g1150 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 126 IPR036638 GO:0046983
Lan7g1150 218 Gene3D - 64 145 IPR036638 GO:0046983
Lan7g1150 218 Coils Coil 102 157 - -
Lan7g1150 218 PANTHER BHLH TRANSCRIPTION FACTOR 1 218 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1150 Lan-Chr7 13668614 13673209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1150 41 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 66.486 6.05e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan7g1150 HLH 1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1150 - - gmx:100787583 293.123