Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1141 ATGGAAAACAAAGTGGGATATGAGAATGATCTCAACCTTATTGCAACAGAACTAAGATTGGGGTTGCCAGGTACAGAGGAAAAGGAAGAGAAAACCATGCAAGGTGTTGTTAAAAACAACAAAAGACAATTGCCAGAAAATTATGAAGAATCTATTTCCATTTCTAAGGACTCTAAAGGCCACCATGCAGAATGTGATTCAGCCCCTCCTGCCAAAGCAAAGATAGTTGGGTGGCCACCAATAAGATCCTACAGGAAAAACAGTTTGCAGGAATCTGAGGGTGGTGGGATATTTGTGAAAGTGAGCATGGATGGAGCCCCTTATCTAAGAAAGATTGATTTGAAGGTTTATGGAGGCTATCTTGAACTACTCAAAGCTCTTGAAACCATGTTCAAGTTGACTATTGGTGAATACTCTGAAAGAGAAGGTTATGAGGGATCTGAATATGCACCTACATATGAAGACAAGGATGGTGATTGGATGCTTGTTGGAGATGTACCATGGGACATGTTTAAGACCACATGCAAAAGGCTAAGAATCATGAAAGGCTCAGAAGCTAAGGGTTTGGGTTGTGGTGTATGA 582 0.4089 MENKVGYENDLNLIATELRLGLPGTEEKEEKTMQGVVKNNKRQLPENYEESISISKDSKGHHAECDSAPPAKAKIVGWPPIRSYRKNSLQESEGGGIFVKVSMDGAPYLRKIDLKVYGGYLELLKALETMFKLTIGEYSEREGYEGSEYAPTYEDKDGDWMLVGDVPWDMFKTTCKRLRIMKGSEAKGLGCGV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1141 193 ProSiteProfiles PB1 domain profile. 96 183 IPR000270 GO:0005515
Lan7g1141 193 PANTHER AUXIN-INDUCED PROTEIN 10 190 - -
Lan7g1141 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 190 IPR003311 GO:0005634|GO:0006355
Lan7g1141 193 SUPERFAMILY CAD & PB1 domains 86 182 - -
Lan7g1141 193 Pfam AUX/IAA family 56 190 IPR033389 -
Lan7g1141 193 Gene3D - 90 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1141 Lan-Chr7 13356715 13358488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1141 99 189 B3 DNA Binding Superfamily AT2G46530 38.462 1.99e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Lan7g1141 AUX_IAA 1.5e-51 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1141 K14484 - gmx:100800212 296.589