Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1125 ATGGCTTCACCGCAACCACCGCCATCGCCGACGCTATCTGCAGCCGCCACTATCCTAGGAAAGTACCAAATATTGCGGTTCCTCGGCCGTGGCAGCTTCGCAAAGGTATACCAGGCACGATCCCTGATCGATGGCACCACCGTGGCGGCGAAGATCATTGACAAATCGAAGACGGTGACTACCGCCATGGAGCCGCAAATCGTTAGGGAAATTGATGCCATGCGCCGCCTCCAGCACCACCCAAACATCCTACGTATCAATGAGGTAATGGCGACAAAGACCAAGATCTACCTCATTGTCGAGTTTGCTGAAGGCGGCGAGCTTTTCTCCAAGATCGCCCGCCACGGCAAGCTGCCGGAGCCACATGCGCGCCGTTATTTCCAACAGCTCGTCTCAGCTCTATGCTATTGCCACCGCCATGGCGTAGCCCACCGTGACCTCAAGCCACAGAACCTTCTCCTCGACGCCGACGGCAACCTCAAGGTCTCTGATTTCGGCCTCTCGGCATTACCGGAGCAGTTAAATGACGGCCTGCTCCGGACGACTTGTGGCACGCCAGCATACACCGCGCCGGAGATCCTCGCCCGGCGGTCATACGATGGTGCAAAAGCTGACGCCTGGTCGTGCGGTCTCATACTCTTCGTCCTTCTTGTCGGTCACCTCCCGTTCGACGAAACAAACATTCCGGCTATGTACAATACAATTAAAAGCCGCAATTACGTGTTTCCAACGTGGATTTCGAAACCGGCACGACACATTATCTTTTGGCTTCTTGACCCAAACCCTAAAAGGAGAATGAAGCTAGATTCCTTATTTGAGAATTCGTGGTTTAAGAAATCTTTGAAATCACAACCAGAGAGTATGTTCGGGTTGGGTTTTAACTACGAGCAGAAGTGTTTGGCTTCGGGTTCGAGTATGAATGCATTTGATATAATATCAATGTCGTCCGGGTTAGACTTGAGGAGATTATTTGAAACAACGTCTAATGAGAAGAGAGAGAACAAGTTTTTTTCTAGTAAGAAGATGGAGGAAGTGGAGGCCAAGGTGAAGGAGGTTGGAGAGGTTTTAGGGTTTAAGGTTGAGGTTGGAAAAAATGGTGCAATTTTATTAGAAAAAGGGAAGGTGGGTTTGGTTTTTGAGGTGTTTGAGATTGTGGCTGAGTTGTTGTTGGTGGTGGTTAAAGTGGTTGATGGTGGTTTGAAGTTTGAGGAGCTTCATTTGGAGGATTGGAAAATTGGACTCCATGATGTTGTTCTTTCTTGGCATACTGAATTGACAATGTGA 1284 0.493 MASPQPPPSPTLSAAATILGKYQILRFLGRGSFAKVYQARSLIDGTTVAAKIIDKSKTVTTAMEPQIVREIDAMRRLQHHPNILRINEVMATKTKIYLIVEFAEGGELFSKIARHGKLPEPHARRYFQQLVSALCYCHRHGVAHRDLKPQNLLLDADGNLKVSDFGLSALPEQLNDGLLRTTCGTPAYTAPEILARRSYDGAKADAWSCGLILFVLLVGHLPFDETNIPAMYNTIKSRNYVFPTWISKPARHIIFWLLDPNPKRRMKLDSLFENSWFKKSLKSQPESMFGLGFNYEQKCLASGSSMNAFDIISMSSGLDLRRLFETTSNEKRENKFFSSKKMEEVEAKVKEVGEVLGFKVEVGKNGAILLEKGKVGLVFEVFEIVAELLLVVVKVVDGGLKFEELHLEDWKIGLHDVVLSWHTELTM* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1125 427 PANTHER SERINE/THREONINE KINASE 14 424 - -
Lan7g1125 427 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1125 427 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1125 427 Gene3D Kinase associated domain 1, KA1 302 419 - -
Lan7g1125 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Lan7g1125 427 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 424 - -
Lan7g1125 427 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Lan7g1125 427 Gene3D Phosphorylase Kinase; domain 1 25 107 - -
Lan7g1125 427 CDD CIPK_C 307 387 - -
Lan7g1125 427 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lan7g1125 427 Gene3D Transferase(Phosphotransferase) domain 1 108 290 - -
Lan7g1125 427 SUPERFAMILY Protein kinase-like (PK-like) 18 293 IPR011009 -
Lan7g1125 427 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1125 427 Pfam NAF domain 304 361 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1125 Lan-Chr7 12896345 12897761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1125 1 425 Miscellaneous Gene Families AT3G23000 54.630 1.34e-156 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan7g1125 Pkinase 4.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1125 K12761 - gmx:100305372 540.806