Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1117 ATGTCTATGCCTTTGTTCAGAAATGTGAAAAGTAATGATGTTTTACACAACTTATCCAACACCGTGAGTATACCTTGTAAAAGGTGGCACAATGCTTTTGTTGCTATTTATTGTTCTAGAGCCCTATTGTCTCACTTCAAACCCAATATTTTACACAACAAATATGAACAAAACTTGTCTTTACCTTGTTCAACTTCTTACACTGTTGTTGATTTGAGCTCAAGCCACCCTTTTCTTGTTGATCAAGCAACCCTTACATCCATTGTCCAAGACAAGAATTTGGACAGCCTTGGAAAACTTGGTGGGGTGAAAGGGTTGGCTTCTGCACTTGGAACCAATGTTGAACAAGGAATCAAAGATGATAATATTGCTAATGATATTGCATGCAGACATGAAGTGTTTGGTTCTAACACTTATCCTAAACCACCTTCAAGGAGTTTCTTTTATTTCTTGGTGGAAGCATTGAAGGACCCCACTATTCTAATTCTTTTGGCTTGTGCTGCACTTTCACTTGGTTTTGGCATAAAGGAGAATGGCATTGAAGAAGGTTGGTATGATGGAGGTAGCATCTTTATTGCTGTGTTTATTGTAATTGCTGTTTCTTGCATTAGCAATTTTAGGCAAAACAGGCAATTTGATAAGCTATCAGAAGCTAGTAATGATATCCAAATTGTTGTGGTTCGAAGCGGGCGCCGCCGAAATGTGTCGATATTTGACATTGTTGTTGGTGATGTGGTGTGTTTGAAGATTGGTGATCAAGTTCCAGCTGATGGGTTATTTGTAGAAGGGCATTCTCTTCAATTGGATGAGTCAAGCATGACAGGGGAGAGTGACAATGTTGAAGTTAATTCCAACCACCATCCGTTCTTGTTTTCGGGCACAAAAGTTGTAGATGGTTATGCCAAAATGCTTGTCACATCTGTGGGTATGAACACAACATGGGGCCAAATGATGAGCTCAATTAGCCATGACACCGGTGAGGAGACACCGTTGCAAACACGTCTCAACAAGCTTACTTCATCCATAGGAATGGTAGGTTTGGCTGTGGCTTTTCTAGTTCTTATTGTTTTGCTCATTCGTTACTTCGTCGGGAAGACAACTGATGAGAATGGAAATAAAATGTTCAATGGGAGTAAGACCAAGTTTGATGACATAGTGAATGCAGTGGTAGGAATGGTAGCTGCCGCGGTCACTATTGTAGTGGTTGCAATTCCTGAAGGGTTGCCATTAGCTGTGACTCTTACCTTGGCTTATTCAATGAAGAAAATGATGGCTGACCAAGCAATGGTGAGAAAACTCTCTGCCTGTGAAACAATGGGGTCTGCTACCACAATTTGTACTGATAAGACAGGCACTCTCACACTCAATCAGATGAAAGTTACAAAGTTTTGGCTTGGCCAACAATCTATAGAAGAGGGTCATTACACATCAATTGCTCCGTATGTTCTACGACTAATCCAAGAAGGCGTAGCACTTAACACAACAGGTAGTGTATACAAGTCTGAATTAGATTCTGTATTTGACTTTTCAGGTAGTCCAACAGAAAAGGCCATTCTTTCATGGGCTGTGTTGGATTTGAACATGGAGATGGAGCAATTGACACAGAATTCTGTTGTGCTACAAGTGGAAGCCTTCAATTCAAAGAAGAAAATGAGTGGTGTTATGATCAGAAGGAAAGTAGATAACACAATCCATGCACATTGGAAAGGTGCAGCTGAGATGGTGCTTAACATGTGTTCAAGATACTATGATGAATCTGGCATTCTTAAAGATCTTGACAACACAAATAGGTTGAAATTGGAACAAATAATTCAAGGAATGGCAGCTAGCAGTCTTCGGTGTATCGCTTTTGCACATACATCAGTTGATGCTAATGAAGAACAAAACAAGAAAGTGAAAGAAGAAGGCCTGACCCTTCTAGGACTTGTAGGCATCAAGGATCCATGTCGTCCGGGGGTAAAGAAAGCTGTCGAAGCTTGCCAACAAGCAGGCGTAAACATCAAAATGATCACAGGTGACAATGTCTTCACGGCGAAAGCTATAGCAACCGAATGTGGCATACTCCGGCCGAATCAAGACACAGTGGGAGCAGTGGTGGAAGGAGAGGAATTTCGAAACTACACACCCGAGGAAAGGTTAGAGAAAATTGATATAATATGTGTGATGGCAAGATCCTCTCCCTTTGATAAACTTTTAATGGTTCAATGCCTTAAACAAAAGGGTCACGTAGTTGCAGTCACTGGGGATGGTACAAATGATGCACCAGCATTGAAGGAAGCCGATATAGGACTTTCTATGGGGATACAAGGCACTGAAGTAGCTAAAGAGAGTTCAGATATTATTATCTTGGACGACAATTTCGCGTCCGTGGCGACAGTTCTAAGATGGGGAAGATGTGTCTACAATAACATCCAGAAATTCATTCAGTTCCAATTGACAGTAAATGTAGCAGCACTTGCAATAAACTTTGTTGCAGCAGTATCAGCAGGGGAAGTTCCACTAACAGCAGTTCAGTTGCTTTGGGTGAATTTGATAATGGACACATTAGGTGCTCTTGCTCTAGCAACCGAAAAACCAACCATAGATTTGATGAACAAACCACCAGTTGGTAGAACTGAACCATTGATCACTAATATCATGTGGAGGAATCTATTAGCACAAGCATTATACCAAATAACTATTCTCTTGACTCTACAATTCAATGGTGAAGCTATATTCAATGTGACTTCAAAGGTAAAAGACACATTGATTTTTAACATATTTGTGCTATGCCAAGTGTTCAATGAATTTAATGCAAGGAAGCTAGAGAAGATGAATGTTTTCAAGGGCATACACCATAACAAGTTATTTCTAAGCATTATTGGGATAACTATTGTACTTCAAGTGGTGATGGTTGAATTCCTTAAGAAATTTGCAGATACTGAGAGATTAAATTGGGGGCAGTGGGGTGCATGTATTATAATTGCAGCTATTTCTTGGCCTATTGGTTGGATTGTGAAGTTGGTACCTGTTCCAGAGAAACCATTACTAAGTTTTCTCAAGATTAAGGGGCAATAA 3057 0.4024 MSMPLFRNVKSNDVLHNLSNTVSIPCKRWHNAFVAIYCSRALLSHFKPNILHNKYEQNLSLPCSTSYTVVDLSSSHPFLVDQATLTSIVQDKNLDSLGKLGGVKGLASALGTNVEQGIKDDNIANDIACRHEVFGSNTYPKPPSRSFFYFLVEALKDPTILILLACAALSLGFGIKENGIEEGWYDGGSIFIAVFIVIAVSCISNFRQNRQFDKLSEASNDIQIVVVRSGRRRNVSIFDIVVGDVVCLKIGDQVPADGLFVEGHSLQLDESSMTGESDNVEVNSNHHPFLFSGTKVVDGYAKMLVTSVGMNTTWGQMMSSISHDTGEETPLQTRLNKLTSSIGMVGLAVAFLVLIVLLIRYFVGKTTDENGNKMFNGSKTKFDDIVNAVVGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQQSIEEGHYTSIAPYVLRLIQEGVALNTTGSVYKSELDSVFDFSGSPTEKAILSWAVLDLNMEMEQLTQNSVVLQVEAFNSKKKMSGVMIRRKVDNTIHAHWKGAAEMVLNMCSRYYDESGILKDLDNTNRLKLEQIIQGMAASSLRCIAFAHTSVDANEEQNKKVKEEGLTLLGLVGIKDPCRPGVKKAVEACQQAGVNIKMITGDNVFTAKAIATECGILRPNQDTVGAVVEGEEFRNYTPEERLEKIDIICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTIDLMNKPPVGRTEPLITNIMWRNLLAQALYQITILLTLQFNGEAIFNVTSKVKDTLIFNIFVLCQVFNEFNARKLEKMNVFKGIHHNKLFLSIIGITIVLQVVMVEFLKKFADTERLNWGQWGACIIIAAISWPIGWIVKLVPVPEKPLLSFLKIKGQ* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1117 1018 Pfam E1-E2 ATPase 223 424 - -
Lan7g1117 1018 PRINTS H+-transporting ATPase (proton pump) signature 600 618 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan7g1117 1018 PRINTS H+-transporting ATPase (proton pump) signature 747 763 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan7g1117 1018 PRINTS H+-transporting ATPase (proton pump) signature 779 804 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan7g1117 1018 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 452 653 IPR023299 GO:0000166
Lan7g1117 1018 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 721 828 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan7g1117 1018 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 190 361 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan7g1117 1018 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 389 470 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan7g1117 1018 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 93 1004 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lan7g1117 1018 Gene3D - 126 322 - -
Lan7g1117 1018 Pfam Cation transporter/ATPase, N-terminus 101 170 IPR004014 -
Lan7g1117 1018 SFLD C1.7: P-type atpase like 428 800 - -
Lan7g1117 1018 SUPERFAMILY HAD-like 444 852 IPR036412 -
Lan7g1117 1018 PRINTS P-type cation-transporting ATPase superfamily signature 269 283 - -
Lan7g1117 1018 PRINTS P-type cation-transporting ATPase superfamily signature 446 460 - -
Lan7g1117 1018 PRINTS P-type cation-transporting ATPase superfamily signature 641 652 - -
Lan7g1117 1018 PRINTS P-type cation-transporting ATPase superfamily signature 663 673 - -
Lan7g1117 1018 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Lan7g1117 1018 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Lan7g1117 1018 SUPERFAMILY Calcium ATPase, transduction domain A 222 320 IPR008250 -
Lan7g1117 1018 ProSitePatterns E1-E2 ATPases phosphorylation site. 448 454 IPR018303 -
Lan7g1117 1018 Gene3D - 443 792 IPR023214 -
Lan7g1117 1018 PANTHER CATION TRANSPORTING ATPASE 15 991 - -
Lan7g1117 1018 SMART Cation_ATPase_N_a_2 99 175 IPR004014 -
Lan7g1117 1018 PANTHER CALCIUM-TRANSPORTING ATPASE 15 991 - -
Lan7g1117 1018 CDD P-type_ATPase_Ca_PMCA-like 130 880 - -
Lan7g1117 1018 Pfam Cation transporting ATPase, C-terminus 832 1002 IPR006068 -
Lan7g1117 1018 SFLD p-type atpase 428 800 IPR044492 -
Lan7g1117 1018 Gene3D - 456 648 IPR023299 GO:0000166
Lan7g1117 1018 SUPERFAMILY Calcium ATPase, transmembrane domain M 101 1003 IPR023298 -
Lan7g1117 1018 Gene3D - 153 1001 - -
Lan7g1117 1018 Pfam haloacid dehalogenase-like hydrolase 443 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1117 Lan-Chr7 12721866 12725197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1117 13 1016 Primary Pumps ATPases AT3G22910 69.109 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1117 K01537 - gmx:100793918 1536.93