Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1115 ATGCCATTGAGACAGATGAAAGAAAGTTCAGAACAACACCTTGTGATCAAAACCCATTTGCAGAATCATATGAATCCACCTAAGAAGGTTCCTAGAGCTGTTCAAAATGGAAAAGGTCCACCACTATTGCCACAACAAGAACCTCTTCATAACCAAACTTCACCACCTAATAGGAACAAGGGAAGAAGAAGGGGTAGAGGGGGAAGGAAATTTGATCAAGGTGATGTTTTGATGAGACCTAGTTGTAGACCTTGCACTGATGTGGTTACAAATACTGCAAATGGATCTGTTGAAAATGGAAACATGAATGGTGGTTGTGACATTGAGATGGGGTACCCTACTTCAAGCAAGTCTTTGAGCTTTGCTCCTAGGCCTGGATATGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGATAAGGACTTGAACCATTATGATGTTACTATTACACCAGAAGTGTCTTCCAAAGTAGTAAACAGGTCCATCATTGCAGAACTTGTGAGGCTGCATAGAGAGTCTGATCTTGGGATGAGGCTTCCTGCATATGATGGCAGAAAAAGTTTGTACACAGCCGGAGCATTTCCGTTTACTTGGAGAGAGTTTAAGATTAAGCTCGTAGATGAAGACGACAGAGTTAATTGCCCGAAAAGAGAAAGAGAATACAAAGTGGTGATTAAGTTTGTTGCTCGGGCAAACTTGCACCACTTAGGCCAGTTTCTAGCCGGTAAGCGTGCTGATGCTCCACAGGAGGCACTCCAAATTCTTGACATTGTACTAAGAGAGCTATCATCTAAGAGGTTTTGCCCCATTGGGAGGTCCTTCTTTTCACCGGATATTAGAACACCGCAACGGCTTGGAGAGGGATTGGAGTCTTGGTGTGGATTTTATCAAAGTATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCTTCTGCTGCATTCATTGAACCTCTTCCAGTAGTGGAATTTGTTGGACAGCTATTAGGAAAAGATGTGTTGTCAAGGCAATTGTCGGATGCTGATCGCATTAAGATTAAGAAGGCCCTTAGAGGAGTAAAAGTTGAAGTAACACATAGAGGGACATTTAGACGAAAATATCGCGTGTCAGGTCTGACATCTCAACCAACAAGGGAACTGGTGTTTCCTGTTGATGAGAACTCGACTATGAAATCGGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTAAATATACTCACCTTCCTTGCCTTCAAGTAGGAAACCAAAAGAAAGCTAATTACTTACCAATGGAGGCCTGCAAAATTGTGGAGGGTCAACGTTACACAAAAAGGTTGAATGAGAAGCAAATTACTGCTCTCTTGAAAGTTACTTGCCAGAGACCTCGTGATCGAGAAAATGATATTTTGCGGACTGTTCAACATAATGCTTATGATCAAGATCCATATGCAAAGGAATTTGGGATCAATATCAGTGAGAAGCTAGCTTCTGTCGAAGCACGGATACTTCCTGCCCCTTGGCTTAAATATCATGATAGTGGGAAAGAAAAGAACTGCTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCATTGGGCATGCATAAATTTTTCACGGAGCGTGCAAGACAGTGTTGCTCACACATTTTGTAACGAGCTTGCCCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAGCCTGTTATCCCCGTCTACAATGCCAAGCCGGAGCAAGTAGAGAAAGCGCTGAAACATGTTTGCCATGTGTCAACAAATAAAACCAAAGGAAAGGAATTAGATCTTTTGTTAGCAATATTGCCCGACAACAACGGCTCTCTCTATGGTGATCTCAAGCGTATCTGTGAAACTGAGCTTGGTATAATTTCGCAATGTTGTCTGACAAAGCATGTCTTTAGGATCACCAAGCAGTACTTAGCTAACGTGTCTTTGAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTGTTGATGCTGTAAGCTGCAGAATACCATTGGTTAGCGACATACCAACTATAATATTTGGAGCAGATGTTACCCACCCGGAAAATGGAGAAGACTCTAGTCCCTCAATAGCAGCTGTTGTAGCATCCCAGGACTGGCCTGAAGTGACAAAATATGCAGGTTTAGTATGTGCTCAAACTCAGAGACAGGAACTAATACAAGATCTGTACAAAACATGGCATGATCCTGTTCGTGGCGTAGTAAGTGGTGGCATGATTAGAGATTTGTTGGTTTCATTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAGTTTTACCAAGTTTTACTTTACGAGTTGGATGCCATCCGCAAGGCATGTGCTTCTTTAGAACCGAATTATCAGCCTCCTGTAACTTTCATAATTGTACAAAAAAGACATCATACTCGGTTGTTCGCAAATAATCATAGAGACAGGAACAGTACTGATAAGAGTGGAAATATATTGCCTGGGACTGTTGTGGATACTAAAATCTGTCATCCAACAGAATTTGATTTTTATCTCTGTAGTCATGCTGGCATCCAGGGTACAAGTCGTCCAGCCCATTATCACGTTTTATGGGACGAAAACAACTTCACAGCCGACGGAATTCAATCTTTGACAAACAACCTGTGTTATACATATGCCAGGTGTACACGCTCTGTATCTGTTGTCCCTCCAGCATATTATGCACATTTAGCCGCATTTCGAGCCCGTTTCTATATGGAACCAGACCTGCAGGAGAATGGCTCATCAGGCGGCGGTAGTGCAGGTCATGGTGGTTCCAAGGCAACACGAGCAGCCGGAGATTGCGGTGTCAAGCCATTGCCAGCCTTAAAAGAAAATGTGAAAAGAGTAATGTTTTATTGTTAG 2958 0.4222 MPLRQMKESSEQHLVIKTHLQNHMNPPKKVPRAVQNGKGPPLLPQQEPLHNQTSPPNRNKGRRRGRGGRKFDQGDVLMRPSCRPCTDVVTNTANGSVENGNMNGGCDIEMGYPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNHYDVTITPEVSSKVVNRSIIAELVRLHRESDLGMRLPAYDGRKSLYTAGAFPFTWREFKIKLVDEDDRVNCPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSSKRFCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRQLSDADRIKIKKALRGVKVEVTHRGTFRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQHNAYDQDPYAKEFGINISEKLASVEARILPAPWLKYHDSGKEKNCLPQVGQWNMMNKKMINGMTVSHWACINFSRSVQDSVAHTFCNELAQMCQVSGMEFNPEPVIPVYNAKPEQVEKALKHVCHVSTNKTKGKELDLLLAILPDNNGSLYGDLKRICETELGIISQCCLTKHVFRITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQTQRQELIQDLYKTWHDPVRGVVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFANNHRDRNSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDLQENGSSGGGSAGHGGSKATRAAGDCGVKPLPALKENVKRVMFYC* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1115 985 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 59 984 - -
Lan7g1115 985 Pfam PAZ domain 352 459 IPR003100 GO:0005515
Lan7g1115 985 SMART PAZ_2_a_3 333 465 IPR003100 GO:0005515
Lan7g1115 985 SUPERFAMILY PAZ domain 323 483 IPR036085 GO:0005515
Lan7g1115 985 Pfam Piwi domain 618 937 IPR003165 GO:0003676
Lan7g1115 985 SMART DUF1785_2 276 328 IPR014811 -
Lan7g1115 985 Gene3D - 686 985 IPR036397 GO:0003676
Lan7g1115 985 ProSiteProfiles Piwi domain profile. 617 938 IPR003165 GO:0003676
Lan7g1115 985 SMART Piwi_a_2 617 938 IPR003165 GO:0003676
Lan7g1115 985 Pfam N-terminal domain of argonaute 133 267 IPR032474 -
Lan7g1115 985 PANTHER PROTEIN ARGONAUTE 10 59 984 - -
Lan7g1115 985 SUPERFAMILY Ribonuclease H-like 609 939 IPR012337 -
Lan7g1115 985 MobiDBLite consensus disorder prediction 19 75 - -
Lan7g1115 985 Pfam Mid domain of argonaute 526 602 IPR032473 -
Lan7g1115 985 ProSiteProfiles PAZ domain profile. 329 443 IPR003100 GO:0005515
Lan7g1115 985 CDD Piwi_ago-like 487 937 IPR045246 -
Lan7g1115 985 Gene3D paz domain 322 447 - -
Lan7g1115 985 Gene3D - 507 680 - -
Lan7g1115 985 CDD PAZ_argonaute_like 328 442 - -
Lan7g1115 985 Pfam Argonaute linker 1 domain 277 326 IPR014811 -
Lan7g1115 985 Pfam Argonaute linker 2 domain 469 515 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1115 Lan-Chr7 12639483 12648085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1115 1 985 Eukaryotic Initiation Factors Gene Family AT5G43810 81.238 0.0 1645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1115 K11593 - gmx:100816999 1778.84