Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1112 ATGCAGATGAAGAAAACAACAGGCCCAAGTTTGAATCAGCTTAACCAAAGAAAGAGGAATTCTGCTTTCCAAGATAAGGGTGCAAGAAATGGCACAGGGAGCCATAATGTTAAGAATCATACTGTTCTGACATATTTAAAGTCTGCTGTCAGAAGATGTGTAGGGTTGTTTCTCCCTGGGAAAAGAAAAACAAGCTCAAAAGTTGTTGGAAATGATGAGAGGAAGAATACAGACAAAGTCAGAGAGTTATCATCTTCAACAGATTTATCATCTAATAATAGTAACAAGGGTTCATCAAAATCAAACTTTTCTCATTCCTATGCATCATCTAGCAGTTCAAGTAATCAGATTGGACCTGGAAACTTCTCATTTGAAGAAATTTACAGGGCAACATCAAAATTCTCTCTAGATAATAAGATTGGAGAAGGTGGTTTTGGAACAGTATATAAGGGAAAACTTAGTAATGGACCTCTTGTGGCTGTAAAGCGCGCCAAGAAGGATGTACAAAACAAGCACTTATCTGAGTTCAAGAATGAAATATACACATTGTCAAAAGTTGAGCACTTGAATCTTGTAAGGTTGTATGGTTATTTGGAGCATGGAGAAGAAAAGATTATTGTTGTTGAGTATGTAAACAATGGGACACTTAGGGAACACTTAGATGGTACGCGAGGACAAGGACTAGAAATCGGAGAACGTCTAGACATAGCAATTGATGTAGCTCATGCAGTTACTTACCTTCATATGTACACAGATCATCCAATTATTCATAGAGACATCAAAGCATCAAACATCTTAATCACTGACAACCTTAGGGCCAAAGTGGCAGACTTTGGTTTCGCTCGGTTGGCTGCAATAGACCCGAGTAAAACCCATATTTCAACTCAAGTTAAAGGAACAGCTGGATATGTGGATCCTGATTACATGCGAACACATCACCTTACCGAAAAGAGTGATGTTTATTCATTTGGTGTGTTGCTTGTTGAAATGATCACAGGACGACATCCCGTTGAACCTCAAAGACAACTCAACGAGAGAGTGACAATTAGATGGGCAATGCAAATGTGGAAACAAGGAGAAGCTGTGGTTGCCATGGATCCGAGGCTTCGAAGAAATCCAGCCTCAAACAAAGCAATAGAGAAAATTTTCAGGCTAGCTTACCAATGTCTTGCACCTATGCGAAAATCGCGGCCATCCATGAAGAATTGTGCTGAGGTTCTATGGGGAATCCGCAAAGATTTTAGAGATAAAGCCTTAACTCATCATTCTTCAAATTTTCCTGAGAGGAATGCTAGGAATAATAAGCATAAGACATTAGTCTCTGCATAG 1329 0.392 MQMKKTTGPSLNQLNQRKRNSAFQDKGARNGTGSHNVKNHTVLTYLKSAVRRCVGLFLPGKRKTSSKVVGNDERKNTDKVRELSSSTDLSSNNSNKGSSKSNFSHSYASSSSSSNQIGPGNFSFEEIYRATSKFSLDNKIGEGGFGTVYKGKLSNGPLVAVKRAKKDVQNKHLSEFKNEIYTLSKVEHLNLVRLYGYLEHGEEKIIVVEYVNNGTLREHLDGTRGQGLEIGERLDIAIDVAHAVTYLHMYTDHPIIHRDIKASNILITDNLRAKVADFGFARLAAIDPSKTHISTQVKGTAGYVDPDYMRTHHLTEKSDVYSFGVLLVEMITGRHPVEPQRQLNERVTIRWAMQMWKQGEAVVAMDPRLRRNPASNKAIEKIFRLAYQCLAPMRKSRPSMKNCAEVLWGIRKDFRDKALTHHSSNFPERNARNNKHKTLVSA* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1112 442 PANTHER OS01G0253100 PROTEIN 4 438 IPR045271 GO:0004714|GO:0006468
Lan7g1112 442 Gene3D Transferase(Phosphotransferase) domain 1 211 433 - -
Lan7g1112 442 Gene3D Phosphorylase Kinase; domain 1 91 210 - -
Lan7g1112 442 SUPERFAMILY Protein kinase-like (PK-like) 109 410 IPR011009 -
Lan7g1112 442 MobiDBLite consensus disorder prediction 63 116 - -
Lan7g1112 442 MobiDBLite consensus disorder prediction 421 442 - -
Lan7g1112 442 MobiDBLite consensus disorder prediction 66 82 - -
Lan7g1112 442 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Lan7g1112 442 MobiDBLite consensus disorder prediction 83 116 - -
Lan7g1112 442 MobiDBLite consensus disorder prediction 1 36 - -
Lan7g1112 442 MobiDBLite consensus disorder prediction 421 435 - -
Lan7g1112 442 Pfam Protein tyrosine and serine/threonine kinase 135 407 IPR001245 GO:0004672|GO:0006468
Lan7g1112 442 SMART serkin_6 134 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1112 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Lan7g1112 442 ProSiteProfiles Protein kinase domain profile. 134 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g1112 442 PANTHER OS02G0821400 PROTEIN 4 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1112 Lan-Chr7 12568846 12572425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1112 106 400 Receptor kinase-like Gene Family AT1G79620 42.053 1.56e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lan7g1112 PK_Tyr_Ser-Thr 3.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1112 - - gmx:100815871 634.024