Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1097 ATGACGTCATCATTAAACAACTACCCACCTCAGCCACTCTCCGACTCCGACACCGATTCCGACGGCGGCGATCCATCCTCCACCTCCCTCCGCCGCCACTCCGATCTCTCCGATTCCATTTTCAAATCTTACTTCCAATTCACCGGTCACTCCTCCTCCGCCACCGCCTCCCCCTCCGACCTCTCCAAAATCCAATCTTTCCTCACATCTTCTTCCTCCGGCGCTCTCTCATGCCTCATTTGTCTCGAACGCATCAAACCCTCCGATCCAACTTGGTCATGCTCTTCCCTCTGCTTCTCCATCTTCCACCTCATTTGTATCCAATCATGGGCACAACAATCTTCCAATCTCTTCGCATCACGCGCCTCCACGCGCCTCCCAATATCCCCCGAGACTGCGTCGGAGACTGCAATCTGGAACTGCCCTAAATGTAGGGTGGAGTACCCCAAATCACAGATCCCAAAGGGGTACTTCTGTTTCTGTGGGAAACTCAAGGACCCTTATAGTGATGATCCATGGGTTTTGCCTCATTCATGTGGTGATGTGTGTGAGAAGCCATTGATGAACAATTGTGGGCACCGTTGCTTGTTGCTTTGCCACCCGGGACCCTGCCCGGCCTGCCCGAAACTCGTGAAAGTTCGATGCTTTTGTGGGTCTAATGATGATGTTAGAAGGTGTGGGTTCAAGGAGTATTCTTGTAATAACCAATGTTCCAAGTTGTTGGATTGTGGGGTTCATGAGTGTGTTGAGATTTGCCACATTGGTGATTGTCCACCGTGTCGAAAAATTGGTGTGTATAGATGCCAATGTGGTAAGAAGAATGAGGAGAGGGAGTGTTTTAATCGCGTTTATCGGTGCGAGGAGCCGTGTGAGAAGAAGCTTAGGTGTGGGAAGCATGTTTGTGAGAGAGGTTGTCATTATGGAGAGTGTGGTGAGTGCCCTTTACAAGGGAAGAGAACTTGCCCTTGTGGGAAGAGGGTCTATGAAGGGTTACCTTGTGATGTACCTGTGCAGGTGTGTGGAGACACTTGTGGTAAGATGCTGAGCTGCGGGTATCATCGGTGCCCCGAAAGGTGCCACCGCGGCCAATGCGCTGAGACTTGTAGAACTGTTGTCAAGAAATGGTGTAGATGTGGCAGCCACAGGAAAGATGTTCCTTGCTGTCAAGATTTGGTATGTGAAAGGAAGTGTCTCACGATGCGGGATTGTGGGCGGCATGCTTGTAAACGACGTTGCTGTGACGGGGATTGCCCTCCCTGCTCAGAGATATGTGGCAGAAGGCTTCGATGTAAGAACCATAAATGCCCGTCCCCATGCCACAGTGGTGCCTGTGCTCCTTGTCCAATAACAGTGACAATTTCATGTGCATGTGGGGAAACACATTTCGAGGTTCCTTGTGGTACTGAAAAGGATCAAAAGCCGCCTAAATGCCCTAAACGATGTCATATTGCTCCTTTATGCCGGCATGCATTAAAATGCAAGCCACACAAATGCCATTATGGAGCCTGCCCGCCTTGTCGGCTACCTTGTGATGAAGAATATCCATGTGGCCACGCATGCAAATTAAGGTGTCATGGTGCTAAACCACCTCCTAATCCGGAGTTTACTCTCAAACCAAAGAAAAAGAAGATTATACAAAATGAATCTGTTCCTGGTACTCCATGCCCTTCTTGCCCGGAACTTGTGTGGAGATCATGCGTTGGGCAACACATCGGAACAGAGAGAATGATGGTCTGCTCTAATAAATCACAATTCTCATGTGAAAATTTGTGTGGAAATCCTCTACCATGTGGTAATCATTATTGTACTAAAACCTGCCATGCCTTGGAGAGCAAGTCTTCCGTGAACCAGCTACATAGAAGCGAGCCTTGTGAAGATTGTTTTCTTTCTTGCCAAAAGGAAAGAGAACCTAGATGTCAACATCACTGTCCTCGGCCATGTCATCCTGGAGATTGCCCTCCATGCAAGGTGCTCATTAAACGGTCATGTCACTGCGGCTCAATGGTCCATGTTTTTGAGTGCATATACTACAATACCTTGTCTGCAAAGGATCAAGAGGCTGTTCGTTCATGTGGTGGGCCATGTCATAGAAAGTTACCAAATTGTACACATTTATGCCCAGAGACATGTCATCCTGGTCAATGCCCAAATCCTGAGAAATGCTGTAAAAAGGTCACCGTTCGTTGCAAGTGCCAAACATTGAAAAAAGAGTGGCTATGTAAAGATGTTCAAGCTGCATATCTTCGCAATGATTGTGACTCAAGTGATATACCAAAAAATCAATTCGGAGCTGGACTTATTCCTTGCAATTCTGAATGTAAGATTAAAGTGCAGGTTGCCGAGTCGGAACTACAATTGCGTAAATCTAGAGTCACAGAGGTTAAAGAGCCAGACAATGAAAAATTGGTTCCAAAACGAAGAAAAAGGCGGGAACGGGTACTAGAATCAACGGAAACATCAAAATTACAGAAAATTATTTCCAGAACGAAGCAACTTCTGCTGTATGTCTTTATTTTGGTCATACTTCTTGTTGCTTCATATTATGGTTACGAGGGACTTTTACGGCTCAATGATTGGATGAATGAAGTTGACGAGCAACGACAAAGATATTCTCGCACCAAATGA 2625 0.4678 MTSSLNNYPPQPLSDSDTDSDGGDPSSTSLRRHSDLSDSIFKSYFQFTGHSSSATASPSDLSKIQSFLTSSSSGALSCLICLERIKPSDPTWSCSSLCFSIFHLICIQSWAQQSSNLFASRASTRLPISPETASETAIWNCPKCRVEYPKSQIPKGYFCFCGKLKDPYSDDPWVLPHSCGDVCEKPLMNNCGHRCLLLCHPGPCPACPKLVKVRCFCGSNDDVRRCGFKEYSCNNQCSKLLDCGVHECVEICHIGDCPPCRKIGVYRCQCGKKNEERECFNRVYRCEEPCEKKLRCGKHVCERGCHYGECGECPLQGKRTCPCGKRVYEGLPCDVPVQVCGDTCGKMLSCGYHRCPERCHRGQCAETCRTVVKKWCRCGSHRKDVPCCQDLVCERKCLTMRDCGRHACKRRCCDGDCPPCSEICGRRLRCKNHKCPSPCHSGACAPCPITVTISCACGETHFEVPCGTEKDQKPPKCPKRCHIAPLCRHALKCKPHKCHYGACPPCRLPCDEEYPCGHACKLRCHGAKPPPNPEFTLKPKKKKIIQNESVPGTPCPSCPELVWRSCVGQHIGTERMMVCSNKSQFSCENLCGNPLPCGNHYCTKTCHALESKSSVNQLHRSEPCEDCFLSCQKEREPRCQHHCPRPCHPGDCPPCKVLIKRSCHCGSMVHVFECIYYNTLSAKDQEAVRSCGGPCHRKLPNCTHLCPETCHPGQCPNPEKCCKKVTVRCKCQTLKKEWLCKDVQAAYLRNDCDSSDIPKNQFGAGLIPCNSECKIKVQVAESELQLRKSRVTEVKEPDNEKLVPKRRKRRERVLESTETSKLQKIISRTKQLLLYVFILVILLVASYYGYEGLLRLNDWMNEVDEQRQRYSRTK* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1097 874 CDD NF-X1-zinc-finger 420 468 - -
Lan7g1097 874 Pfam NF-X1 type zinc finger 424 448 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 403 421 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 243 261 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 350 369 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 497 507 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 597 607 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 191 208 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 296 314 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 Pfam NF-X1 type zinc finger 640 656 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 702 724 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 403 422 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 191 209 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 350 370 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 516 560 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 296 315 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 430 449 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 378 399 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 243 262 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 493 508 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 597 629 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 SMART znfxneu3 639 657 IPR000967 GO:0005634|GO:0008270
Lan7g1097 874 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 11 871 IPR034078 GO:0003700
Lan7g1097 874 CDD NF-X1-zinc-finger 179 227 - -
Lan7g1097 874 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 11 871 - -
Lan7g1097 874 CDD NF-X1-zinc-finger 340 389 - -
Lan7g1097 874 CDD NF-X1-zinc-finger 639 668 - -
Lan7g1097 874 MobiDBLite consensus disorder prediction 1 33 - -
Lan7g1097 874 CDD NF-X1-zinc-finger 233 279 - -
Lan7g1097 874 Coils Coil 856 874 - -
Lan7g1097 874 CDD NF-X1-zinc-finger 286 329 - -
Lan7g1097 874 CDD NF-X1-zinc-finger 393 441 - -
Lan7g1097 874 SUPERFAMILY RING/U-box 77 150 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Lan7g1097 zf-NF-X1 0.0028 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1097 K15683 - gmx:100799540 1519.98